RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 WDR5BQ86VZ2 330 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 METTL23Q86XA0 190 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 CMTM8Q8IZV2 173 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 ZSWIM2Q8NEG5 633 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 CXorf38Q8TB03 319 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 NETO1Q8TDF5 533 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 USP13Q92995 863 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 EPSTI1Q96J88 318 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 FBRSL1Q9HCM7 1045 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 USP24Q9UPU5 2620 aa9.01□□□□□ -0.97
CTNNA1-203ENST00000517534 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 CCDC163A0A0D9SF12 145 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 MYMKA6NI61 221 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 SOBPA7XYQ1 873 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 KPNA7A9QM74 516 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 TBCAO75347 108 aaKnown RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 TADA3O75528 432 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 BMP15O95972 392 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 NLRP12P59046 1061 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 PTPAQ15257 358 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 SV2CQ496J9 727 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 TXNDC8Q6A555 127 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 TRIM68Q6AZZ1 485 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 FSTL4Q6MZW2 842 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 DYMQ7RTS9 669 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 MON1AQ86VX9 555 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 SFR1Q86XK3 245 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 DCP1BQ8IZD4 617 aaKnown RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 PDCL2Q8N4E4 241 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 POMGNT1Q8WZA1 660 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 HVCN1Q96D96 273 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 GCNAQ96QF7 691 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 PKMYT1Q99640 499 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 EBF3Q9H4W6 596 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 TDP1Q9NUW8 608 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 POLR3BQ9NW08 1133 aaPredicted RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 THG1LQ9NWX6 298 aaKnown RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 ABI2Q9NYB9 513 aaPredicted RBP9□□□□□ -0.97
CTNNA1-203ENST00000517534 ZMYM5Q9UJ78 669 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 L1RE1Q9UN81 338 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 SMC3Q9UQE7 1217 aa9□□□□□ -0.97
CTNNA1-203ENST00000517534 TM4SF5O14894 197 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 AXIN1O15169 862 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PRPF40AO75400 957 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 KRT37O76014 449 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 NOL4O94818 638 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 IL18RAPO95256 599 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 EGFP01133 1207 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 ARSAP15289 507 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 DDX6P26196 483 aaKnown RBP eCLIP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PXNP49023 591 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 GALK1P51570 392 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 RUNX3Q13761 415 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 ZNF268Q14587 947 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 POSTNQ15063 836 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 DDR2Q16832 855 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PPM1JQ5JR12 505 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 SDHAF4Q5VUM1 108 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 NAIF1Q69YI7 327 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 CEP68Q76N32 757 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 BRAPQ7Z569 592 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 OSTM1Q86WC4 334 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 BRSK2Q8IWQ3 736 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 STKLD1Q8NE28 680 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 LEO1Q8WVC0 666 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 LOXL4Q96JB6 756 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 FAM84AQ96KN4 292 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 ACBD6Q9BR61 282 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 FAM213AQ9BRX8 229 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PI4K2AQ9BTU6 479 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PCDHB5Q9Y5E4 795 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 CLIC4Q9Y696 253 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 TICRRQ7Z2Z1 1910 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 LAMA1P25391 3075 aa8.99□□□□□ -0.97
CTNNA1-203ENST00000517534 PDCD11Q14690 1871 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 GABRDO14764 452 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 HCRTO43612 131 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 FOXD2O60548 495 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 ITGB3P05106 788 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 CSH1P0DML2 217 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 CSH2P0DML3 217 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 GARTP22102 1010 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 ACAT1P24752 427 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 CYP2F1P24903 491 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 POLR2BP30876 1174 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 GJA4P35212 333 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 AVPR1AP37288 418 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 PNPLA4P41247 253 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 RAP1GAPP47736 663 aa8.98□□□□□ -0.97
CTNNA1-203ENST00000517534 CASP5P51878 434 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms