RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CHCHD4Q8N4Q1 142 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 STYXQ8WUJ0 223 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 HERVK_113Q902F9 699 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 MSLNLQ96KJ4 702 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 PKNOX2Q96KN3 472 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 DHX36Q9H2U1 1008 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 SACM1LQ9NTJ5 587 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 PIH1D1Q9NWS0 290 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 SIDT1Q9NXL6 827 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 MOCS1Q9NZB8 636 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 CEP72Q9P209 647 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 NFKBIL1Q9UBC1 381 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 AGAP1Q9UPQ3 857 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 MAN2B2Q9Y2E5 1009 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 MED16Q9Y2X0 877 aa6.47□□□□□ -1.37
CTNNA1-202ENST00000517533 A0A087X0M5 115 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 A0A1B0GX30 115 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 TMEM233B4DJY2 109 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 HOXA3O43365 443 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 USO1O60763 962 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 SLC43A1O75387 559 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 DNAJB5O75953 348 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 ATP5JP18859 108 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 SLC6A2P23975 617 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 NOMO3P69849 1222 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 PTK2BQ14289 1009 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 KIF22Q14807 665 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 LMBRD2Q68DH5 695 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 SULT6B1Q6IMI4 303 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 ZNF529Q6P280 563 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 MICU3Q86XE3 530 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 SHCBP1Q8NEM2 672 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 IPO4Q8TEX9 1081 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 KBTBD7Q8WVZ9 684 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 RSPH1Q8WYR4 309 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 PYM1Q9BRP8 204 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 IGSF9Q9P2J2 1179 aa6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 SCAF8Q9UPN6 1271 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-202ENST00000517533 A0A0B4J269 797 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 TRIM43BA6NCK2 446 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 PGPEP1LA6NFU8 196 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 BTN3A1O00481 513 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 P4HA2O15460 535 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 DOK2O60496 412 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 ZBED4O75132 1171 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 PRSS23O95084 383 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 TSPAN15O95858 294 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 DNTTP04053 509 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 GJB1P08034 283 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 NPTX2P47972 431 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 DRG2P55039 364 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 NPEPPSP55786 919 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 RAP2BP61225 183 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 CRB2Q5IJ48 1285 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 KIAA1614Q5VZ46 1190 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 HAUS3Q68CZ6 603 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 OGFOD2Q6N063 350 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 HERC6Q8IVU3 1022 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 FTSJ3Q8IY81 847 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 NRSN1Q8IZ57 195 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 PCSK9Q8NBP7 692 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 TRIM43Q96BQ3 446 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 NEIL1Q96FI4 390 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 KCNC2Q96PR1 638 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 TREX2Q9BQ50 279 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 BRIP1Q9BX63 1249 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 CPEB1Q9BZB8 566 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 JMJD4Q9H9V9 463 aa6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 SRP68Q9UHB9 627 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-202ENST00000517533 FAM170AA1A519 330 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 E9PLN8 166 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 RFXAPO00287 272 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 MTA2O94776 668 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 IL1R1P14778 569 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 JUPP14923 745 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 STAT1P42224 750 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 PSMC1P62191 440 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 CTBP1Q13363 440 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 DLGAP5Q15398 846 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 GPRIN1Q7Z2K8 1008 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 ZNF713Q8N859 430 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 RNF169Q8NCN4 708 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 SPPL3Q8TCT6 385 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 NMD3Q96D46 503 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 ASB2Q96Q27 587 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 GDF15Q99988 308 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 VKORC1Q9BQB6 163 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 AGXT2Q9BYV1 514 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 MEGF9Q9H1U4 602 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 GSTO2Q9H4Y5 243 aa6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 ELAC1Q9H777 363 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-202ENST00000517533 FEM1BQ9UK73 627 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms