RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 VCAM1P19320 739 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RBP5P82980 135 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 PARD3BQ8TEW8 1205 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 VCX3AQ9NNX9 186 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RAB6BQ9NRW1 208 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZFATQ9P243 1243 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 AJAP1Q9UKB5 411 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 NVLO15381 856 aaKnown RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAFGO15525 162 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 KCNN4O15554 427 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 SHMT1P34896 483 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RHBDL3P58872 404 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM132DQ14C87 1099 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ANKRD20A2Q5SQ80 823 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ANKRD20A1Q5TYW2 823 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 KLC3Q6P597 504 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 LVRNQ6Q4G3 990 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 SLFN11Q7Z7L1 901 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 LRRC43Q8N309 656 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 CKAP2Q8WWK9 683 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ACSF2Q96CM8 615 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TNIP3Q96KP6 325 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 FGD4Q96M96 766 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TTC1Q99614 292 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 KCNQ5Q9NR82 932 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TBX20Q9UMR3 447 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TJP1Q07157 1748 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TRPA1O75762 1119 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 KRT16P08779 473 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 CYP11B1P15538 503 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 TYK2P29597 1187 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 GTF2H1P32780 548 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RFC1P35251 1148 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 CENPCQ03188 943 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ACAD10Q6JQN1 1059 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 RIBC1Q8N443 379 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 NINJ2Q9NZG7 142 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 STXBP5LQ9Y2K9 1186 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 JAM2P57087 298 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 CXCL9Q07325 125 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ART4Q93070 314 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZBTB10Q96DT7 871 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 FAM161BQ96MY7 647 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 MYLK2Q9H1R3 596 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 Q9H521 79 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 SMYD3Q9H7B4 428 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 SARS2Q9NP81 518 aaKnown RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 MRPS35P82673 323 aaKnown RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 WLSQ5T9L3 541 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 CEP120Q8N960 986 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 KAT5Q92993 513 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 KLF6Q99612 283 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 A8MUI8 341 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 TGFB1I1O43294 461 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 CPB1P15086 417 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 NBPF12Q5TAG4 269 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 NUDCD3Q8IVD9 361 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 ACP6Q9NPH0 428 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 ANKEF1Q9NU02 776 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 DLGAP2Q9P1A6 1054 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 MID2Q9UJV3 735 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 COG5Q9UP83 839 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 EP400Q96L91 3159 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 PGK2P07205 417 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 CHKAP35790 457 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 NLRP11P59045 1033 aaKnown RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 ORC1Q13415 861 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 NOP9Q86U38 636 aaKnown RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 PALB2Q86YC2 1186 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 TTC39CQ8N584 583 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 DHX38Q92620 1227 aaKnown RBP11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLC5A5Q92911 643 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZNF560Q96MR9 790 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 BCL9LQ86UU0 1499 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
PCDHGA1-202ENST00000517417 TTC36A6NLP5 189 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCDC22O60826 627 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms