RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GSTO2Q9H4Y5 243 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 KCNK12Q9HB15 430 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 SAYSD1Q9NPB0 183 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 PRDM8Q9NQV8 689 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 ITM2CQ9NQX7 267 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 HELLSQ9NRZ9 838 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 DNMT3BQ9UBC3 853 aaKnown RBP3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 ITGB1BP2Q9UKP3 347 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 SHOC2Q9UQ13 582 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 KCTD3Q9Y597 815 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 CDY1Q9Y6F8 540 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 SLC30A1Q9Y6M5 507 aa3.91□□□□□ -1.78
RNU6-840P-201ENST00000517275 A0A0B4J269 797 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 RRN3P2A6NIE6 340 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 PRR5-ARHGAP8B1AHC4 643 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 EIF3FO00303 357 aaPredicted RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 DCLK1O15075 740 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 EPB41L2O43491 1005 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 ASNA1O43681 348 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 RRP9O43818 475 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 TRIM13O60858 407 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 RASSF9O75901 435 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 STC2O76061 302 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 RHOBTB3O94955 611 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 NTSR2O95665 410 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 CR2P20023 1033 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 LRPAP1P30533 357 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 MCM2P49736 904 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 IRAK1P51617 712 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 PNLIPRP1P54315 467 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 EIF5P55010 431 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 KIAA2012Q0VF49 1180 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 GRM1Q13255 1194 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 ACAP1Q15027 740 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 SURF1Q15526 300 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 TMTC4Q5T4D3 741 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 RETSATQ6NUM9 610 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 ZDHHC24Q6UX98 284 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 TMTC1Q8IUR5 882 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 HERC6Q8IVU3 1022 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 SUGP1Q8IWZ8 645 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 CLASRPQ8N2M8 674 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 MPP5Q8N3R9 675 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 MDGA1Q8NFP4 955 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 FAM84AQ96KN4 292 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 PYM1Q9BRP8 204 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 ZCWPW1Q9H0M4 648 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 PABPC3Q9H361 631 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 ZHX3Q9H4I2 956 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 VPS51Q9UID3 782 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 CNOT6Q9ULM6 557 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 MTO1Q9Y2Z2 717 aaKnown RBP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 NEU2Q9Y3R4 380 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 HS3ST4Q9Y661 456 aa3.9□□□□□ -1.79
RNU6-840P-201ENST00000517275 DIRC3C9JPN6 131 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 PIP5K1BO14986 540 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 HOXC11O43248 304 aaPredicted RBP3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 NOBOXO60393 691 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 KIF20AO95235 890 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 TK1P04183 234 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 FCER1AP12319 257 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 ADD2P35612 726 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 AFF3P51826 1226 aaKnown RBP3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 LINC00310P59036 64 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 MPP1Q00013 466 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 LMOD3Q0VAK6 560 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 IQCB1Q15051 598 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 FAM110CQ1W6H9 321 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 FAM214AQ32MH5 1076 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 ADCK5Q3MIX3 580 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 MGAT5BQ3V5L5 792 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 PLA1AQ53H76 456 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 AGAP9Q5VTM2 703 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 METRNLQ641Q3 311 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 CRTC1Q6UUV9 634 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 RINLQ6ZS11 566 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 C1orf122Q6ZSJ8 110 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 MOGAT3Q86VF5 341 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 SLC44A2Q8IWA5 706 aaPredicted RBP3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 RHOT2Q8IXI1 618 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 CFAP52Q8N1V2 620 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 PCSK9Q8NBP7 692 aaKnown RBP3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 FAM46DQ8NEK8 389 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 TBC1D15Q8TC07 691 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 POC1BQ8TC44 478 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 ST8SIA2Q92186 375 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 MED15Q96RN5 788 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 DPYSL5Q9BPU6 564 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 NUDT22Q9BRQ3 303 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 RTKNQ9BST9 563 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 SLC46A2Q9BY10 475 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 PCDHAC1Q9H158 963 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 ZSCAN32Q9NX65 697 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 NCDNQ9UBB6 729 aa3.89□□□□□ -1.79
RNU6-840P-201ENST00000517275 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms