RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 IL12RB1P42701 662 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 LILRA4P59901 499 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 ITIH3Q06033 890 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 NPNTQ6UXI9 565 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 DAAM2Q86T65 1068 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 CHPFQ8IZ52 775 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 DDX17Q92841 729 aaKnown RBP6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 FAM136AQ96C01 138 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 MTFMTQ96DP5 389 aaKnown RBP6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 ZNF764Q96H86 408 aaPredicted RBP6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
SCARNA1-201ENST00000517138 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 NR2F6P10588 404 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 PCSK6P29122 969 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 UCP3P55916 312 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 NXPH1P58417 271 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 LONRF3Q496Y0 759 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 TSTD2Q5T7W7 516 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 SPATA5L1Q9BVQ7 753 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 PTGFRNQ9P2B2 879 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 XPR1Q9UBH6 696 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 DDX20Q9UHI6 824 aaKnown RBP6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 ADAM21Q9UKJ8 722 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 SSX2IPQ9Y2D8 614 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 MED16Q9Y2X0 877 aa6.57□□□□□ -1.36
SCARNA1-201ENST00000517138 ITPKBP27987 946 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 SLC11A2P49281 568 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 AGFG1P52594 562 aaKnown RBP6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 LLGL1Q15334 1064 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 TBCCQ15814 346 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 ZNF280BQ86YH2 543 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 FKBP10Q96AY3 582 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 SLC17A6Q9P2U8 582 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 SERTAD3Q9UJW9 196 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 PLEKHM1Q9Y4G2 1056 aa6.56□□□□□ -1.36
SCARNA1-201ENST00000517138 FER1L4A9Z1Z3 1794 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 TMEM233B4DJY2 109 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 hCG_1984214I3L0E3 225 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 SOAT2O75908 522 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 JUPP14923 745 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 ARFIP2P53365 341 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 ANO6Q4KMQ2 910 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 AKNAD1Q5T1N1 836 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 CXorf57Q6NSI4 855 aaKnown RBP6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 MAVSQ7Z434 540 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 AMIGO2Q86SJ2 522 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 ZNF384Q8TF68 577 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 PBKQ96KB5 322 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 TRIM54Q9BYV2 358 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 CPNE5Q9HCH3 593 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 MRPS17Q9Y2R5 130 aaKnown RBP6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 ENTPD2Q9Y5L3 495 aa6.55□□□□□ -1.36
SCARNA1-201ENST00000517138 USP19O94966 1318 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 CLCN2P51788 898 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 PROK1P58294 105 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 CTBP1Q13363 440 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 MLC1Q15049 377 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 IQCB1Q15051 598 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 ZIK1Q3SY52 487 aaPredicted RBP6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 ARHGAP40Q5TG30 622 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 RASAL3Q86YV0 1011 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 TCEAL8Q8IYN2 117 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 MAGEB6Q8N7X4 407 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 IL31RAQ8NI17 732 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 UROC1Q96N76 676 aa6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 PIH1D1Q9NWS0 290 aaKnown RBP6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 ARPP21Q9UBL0 812 aaPredicted RBP6.54□□□□□ -1.36
SCARNA1-201ENST00000517138 A0A1W2PPL8 197 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 MASP2O00187 686 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 TSPAN6O43657 245 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 ATXN1LP0C7T5 689 aaKnown RBP6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 ZFXP17010 805 aaPredicted RBP6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 ZNF37AP17032 561 aaPredicted RBP6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 LIPAP38571 399 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 LOXL3P58215 753 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 SLC15A4Q8N697 577 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 DNAJC5GQ8N7S2 189 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 MAML1Q92585 1016 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 C22orf23Q9BZE7 217 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 SMURF2Q9HAU4 748 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 CNNM1Q9NRU3 951 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 TBC1D30Q9Y2I9 924 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 TMX2Q9Y320 296 aa6.53□□□□□ -1.36
SCARNA1-201ENST00000517138 CCDC151A5D8V7 595 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 BTN3A1O00481 513 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 URI1O94763 535 aaPredicted RBP6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 ELLP55199 621 aaPredicted RBP6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 NXNQ6DKJ4 435 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 RGS7BPQ6MZT1 257 aaPredicted RBP6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 LAYNQ6UX15 382 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
SCARNA1-201ENST00000517138 KIAA0319LQ8IZA0 1049 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms