RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CCDC81Q6ZN84 652 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 Q7L0L9 218 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ADSSL1Q8N142 457 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GPD1LQ8N335 351 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MICALL1Q8N3F8 863 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GUF1Q8N442 669 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 XXYLT1Q8NBI6 393 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GSTCDQ8NEC7 633 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HNRNPLLQ8WVV9 542 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 DHTKD1Q96HY7 919 aaPredicted RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 SHDQ96IW2 340 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 ZNF558Q96NG5 402 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 TSG101Q99816 390 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 COLEC11Q9BWP8 271 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 CWH43Q9H720 699 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 NRDE2Q9H7Z3 1164 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PLEKHA5Q9HAU0 1116 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RC3H2Q9HBD1 1191 aaKnown RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 AGPAT3Q9NRZ7 376 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PPT2Q9UMR5 302 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 FAN1Q9Y2M0 1017 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 PRG3Q9Y2Y8 225 aaPredicted RBP6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 RWDD3Q9Y3V2 267 aa6.28□□□□□ -1.4
SCARNA6.1-201ENST00000516989 MICAL3Q7RTP6 2002 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TTC26A0AVF1 554 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 FAM221AA4D161 298 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CASTOR2A6NHX0 329 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PTGESO14684 152 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NRP1O14786 923 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PSMA7O14818 248 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SMAD7O15105 426 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CETN3O15182 167 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 INPPL1O15357 1258 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CSPG5O95196 566 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CPB1P15086 417 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 KCNE1P15382 129 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NME2P22392 152 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CCNE1P24864 410 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PBX3P40426 434 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PPP1R2P41236 205 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SLC11A1P49279 550 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 FXR1P51114 621 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 STX17P56962 302 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NLRP12P59046 1061 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TFAMQ00059 246 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 KRT17Q04695 432 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 GRIK3Q13003 919 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TUSC3Q13454 348 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 XKR4Q5GH76 650 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CCDC183Q5T5S1 534 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 ANKRD40Q6AI12 368 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CAVIN1Q6NZI2 390 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 FAM35AQ86V20 835 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CBWD2Q8IUF1 395 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CREBRFQ8IUR6 639 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CD302Q8IX05 232 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 COLGALT2Q8IYK4 626 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 DEFB123Q8N688 67 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TRIML1Q8N9V2 468 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 COLGALT1Q8NBJ5 622 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 MICAL1Q8TDZ2 1067 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CACTINQ8WUQ7 758 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NELFBQ8WX92 580 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 RSPH1Q8WYR4 309 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 RABGGTAQ92696 567 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 P2RX5Q93086 422 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SYAP1Q96A49 352 aaPredicted RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 C18orf25Q96B23 403 aaPredicted RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CCDC127Q96BQ5 260 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PLD4Q96BZ4 506 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 EEF2KMTQ96G04 330 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TMEM169Q96HH4 297 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SNX27Q96L92 541 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 ZMAT2Q96NC0 199 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SRPK1Q96SB4 655 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TMEM175Q9BSA9 504 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PLVAPQ9BX97 442 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TTYH1Q9H313 450 aaPredicted RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PRDM12Q9H4Q4 367 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SLC38A7Q9NVC3 462 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 RBAKQ9NYW8 714 aaPredicted RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SPG21Q9NZD8 308 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 DNAJB4Q9UDY4 337 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PUF60Q9UHX1 559 aaKnown RBP6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms