RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SNRNP70P08621 437 aaKnown RBP-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 KCNA2P16389 499 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 ANOS1P23352 680 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 DNM2P50570 870 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 PPP2R2AP63151 447 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 PDE4CQ08493 712 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 PDCD1Q15116 288 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 PWP2Q15269 919 aaKnown RBP-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 SEC23BQ15437 767 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 TBCCQ15814 346 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 B4GALNT3Q6L9W6 998 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZNF774Q6NX45 483 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZNF584Q8IVC4 421 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 LMNTD1Q8N9Z9 388 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 IL17RCQ8NAC3 791 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 DAZAP1Q96EP5 407 aaKnown RBP-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 HIST1H2AHQ96KK5 128 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 TUBGCP5Q96RT8 1024 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 EPYCQ99645 322 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 HIST1H2AJQ99878 128 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 GPRC5DQ9NZD1 345 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 MYO6Q9UM54 1294 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 TRAF6Q9Y4K3 522 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 INSL5Q9Y5Q6 135 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 PRSS21Q9Y6M0 314 aa-0.13□□□□□ -2.43
RNU6-539P-201ENST00000516665 DHX57Q6P158 1386 aaKnown RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 TCP11X1B4DZS4 312 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZNF814B7Z6K7 855 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 UBE2Q2LH0YL09 131 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 TPP1O14773 563 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 SUN1O94901 812 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 POMCP01189 267 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 SRGAP2CP0DJJ0 459 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ENGP17813 658 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ALDH4A1P30038 563 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 GIPRP48546 466 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 NR0B1P51843 470 aaKnown RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 B4GALNT1Q00973 533 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 RBM20Q5T481 1227 aaKnown RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 NUGGCQ68CJ6 796 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ABHD17CQ6PCB6 329 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ABHD15Q6UXT9 468 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 PNISRQ8TF01 805 aaKnown RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 NUP133Q8WUM0 1156 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 SNX19Q92543 992 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 SPON2Q9BUD6 331 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 MRI1Q9BV20 369 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 RBM4Q9BWF3 364 aaKnown RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 DUSP22Q9NRW4 184 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 FAM30AQ9NZY2 134 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 CELA1Q9UNI1 258 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 COG5Q9UP83 839 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 MED16Q9Y2X0 877 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 PCDHA8Q9Y5H6 950 aa-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 SOS1Q07889 1333 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-539P-201ENST00000516665 ARVCFO00192 962 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 FOXH1O75593 365 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 FGF5P12034 268 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 ARSAP15289 507 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 ALOX15P16050 662 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 GATA2P23769 480 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 FNTBP49356 437 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 RENBPP51606 427 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 PHC1P78364 1004 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 CRYZQ08257 329 aaKnown RBP-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 ADCY2Q08462 1091 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 HABP2Q14520 560 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 PTGR1Q14914 329 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 NCAPHQ15003 741 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 ZNF750Q32MQ0 723 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 PDZD4Q76G19 769 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 TMC4Q7Z404 712 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 TMPRSS9Q7Z410 1059 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 KLHDC4Q8TBB5 520 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 SEC16BQ96JE7 1060 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 CRBNQ96SW2 442 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 FSD1LQ9BXM9 530 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 TLR10Q9BXR5 811 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 PCDHA12Q9UN75 941 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 CKAP5Q14008 2032 aa-0.15□□□□□ -2.43
RNU6-539P-201ENST00000516665 A0A1W2PPC1 479 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 TMEM232C9JQI7 657 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 XPNPEP2O43895 674 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 EXOC3O60645 756 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 TMEM127O75204 238 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 NXPH3O95157 252 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 PCDH8O95206 1070 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 PDE8BO95263 885 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 PDHA1P08559 390 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 HOXC6P09630 235 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 PRKCSHP14314 528 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 GATA1P15976 413 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 CANXP27824 592 aaKnown RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 ALDH7A1P49419 539 aaKnown RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 ANXA11P50995 505 aaKnown RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 ALDH5A1P51649 535 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 CASP7P55210 303 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 KRTAP12-3P60328 96 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 MGAT5Q09328 741 aa-0.16□□□□□ -2.44
RNU6-539P-201ENST00000516665 GTF2H3Q13889 308 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms