RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SPATA31A6Q5VVP1 1343 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 FMO5P49326 533 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 CLCN6P51797 869 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 NPEPPSP55786 919 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 PTK6Q13882 451 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 FUT11Q495W5 492 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 AP1ARQ63HQ0 302 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ALKBH2Q6NS38 261 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 EXOSC4Q9NPD3 245 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF229Q9UJW7 825 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 NCAPD2Q15021 1401 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ALDH2P05091 517 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 PSMA3P25788 255 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 CLCN3P51790 818 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 MS4A14Q96JA4 679 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 KIF2CQ99661 725 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 SHCBP1LQ9BZQ2 653 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 GGT7Q9UJ14 662 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TEX33O43247 280 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 WBP4O75554 376 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 POMCP01189 267 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 SUPT20HL2P0C7V6 817 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RPAINQ86UA6 219 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF512BQ96KM6 892 aaPredicted RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TRABDQ9H4I3 376 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 KCNH7Q9NS40 1196 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TTC26A0AVF1 554 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 EVPLLA8MZ36 301 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 FYNP06241 537 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 POLBP06746 335 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ATP6V1C1P21283 382 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 GTF2E2P29084 291 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 OXCT1P55809 520 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 HHIPL2Q6UWX4 724 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 KRT35Q92764 455 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 FAM187AA6NFU0 413 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TSPAN3O60637 253 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 ATP5HO75947 161 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RPS6P62753 249 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 RARS2Q5T160 578 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 CENPTQ96BT3 561 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 SGF29Q96ES7 293 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 EXO5Q9H790 373 aa11.47□□□□□ -0.57
TRIM41-209ENST00000515834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 CAB39Q9Y376 341 aaPredicted RBP11.47□□□□□ -0.57
TRIM41-209ENST00000515834 TRIM16O95361 564 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 FGFR2P21802 821 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 PGS1Q32NB8 556 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 ADCK1Q86TW2 530 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 PLD3Q8IV08 490 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 PPP1R2P1Q96PQ5 205 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 KCTD10Q9H3F6 313 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 DYRK1BQ9Y463 629 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 ERVK-7P63135 1459 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 SLC16A3O15427 465 aaKnown RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 ACOT1Q86TX2 421 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 TFB1MQ8WVM0 346 aaKnown RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 TAF1DQ9H5J8 278 aaPredicted RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 NPHS2Q9NP85 383 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 UBQLN1Q9UMX0 589 aaKnown RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 CBX4O00257 560 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 MAP3K6O95382 1288 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 CDH2P19022 906 aaPredicted RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 PTGER2P43116 358 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 SERPINB4P48594 390 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF200P98182 395 aaPredicted RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 ATP2C1P98194 919 aaPredicted RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 PRMT1Q99873 361 aaKnown RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 DDX28Q9NUL7 540 aaKnown RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 AKAP7Q9P0M2 348 aaPredicted RBP11.46□□□□□ -0.57
TRIM41-209ENST00000515834 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.57
TRIM41-209ENST00000515834 IGSF9BQ9UPX0 1349 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 H0YC42 278 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 RHOCP08134 193 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 NEK2P51955 445 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 KCNK10P57789 538 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 STX3Q13277 289 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 HIC1Q14526 733 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 GALNTL6Q49A17 601 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 AIM2O14862 343 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 ZNF500O60304 480 aaPredicted RBP11.46□□□□□ -0.58
TRIM41-209ENST00000515834 SLC2A3P11169 496 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms