RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TRIM49P0CI25 452 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 TRIM49CP0CI26 452 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
LMNA-225ENST00000515824 GTF2H1P32780 548 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 PIK3CAP42336 1068 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 MCCD1P59942 119 aaPredicted RBP20.73■□□□□ 0.91
LMNA-225ENST00000515824 MAPRE1Q15691 268 aaKnown RBP20.73■□□□□ 0.91
LMNA-225ENST00000515824 KLHL10Q6JEL2 608 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 FAM171BQ6P995 826 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 C4orf50Q6ZRC1 276 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 MTSS1LQ765P7 747 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 ZC3H3Q8IXZ2 948 aaKnown RBP20.73■□□□□ 0.91
LMNA-225ENST00000515824 TRIML1Q8N9V2 468 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 RSAD2Q8WXG1 361 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 PKMYT1Q99640 499 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 IMPG2Q9BZV3 1241 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 MMRN2Q9H8L6 949 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 TMEM8AQ9HCN3 771 aa20.73■□□□□ 0.91
LMNA-225ENST00000515824 BICDL2A1A5D9 508 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 PPP1R3GB7ZBB8 358 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 SLC16A3O15427 465 aaKnown RBP20.72■□□□□ 0.91
LMNA-225ENST00000515824 HCRTO43612 131 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 FGF19O95750 216 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 HLA-DRAP01903 254 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 CEBPBP17676 345 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 BMP6P22004 513 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 CCR2P41597 374 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 RPL10AP62906 217 aaKnown RBP20.72■□□□□ 0.91
LMNA-225ENST00000515824 PPP3CAQ08209 521 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 HTR4Q13639 388 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 CCDC150Q8NCX0 1101 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 TCEAL4Q96EI5 215 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 FUBP3Q96I24 572 aaKnown RBP eCLIP20.72■□□□□ 0.91
LMNA-225ENST00000515824 GBP4Q96PP9 640 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 LPIN3Q9BQK8 851 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 MAGEC2Q9UBF1 373 aaPredicted RBP20.72■□□□□ 0.91
LMNA-225ENST00000515824 NUMBLQ9Y6R0 609 aa20.72■□□□□ 0.91
LMNA-225ENST00000515824 ATP2C2O75185 946 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 ASS1P00966 412 aaKnown RBP20.71■□□□□ 0.91
LMNA-225ENST00000515824 ATF6P18850 670 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 CYP2F1P24903 491 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 PSMC1P62191 440 aaKnown RBP20.71■□□□□ 0.91
LMNA-225ENST00000515824 CFAP221Q4G0U5 840 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 KRT39Q6A163 491 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 PARM1Q6UWI2 310 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 MYCBPAPQ8TBZ2 947 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 GIPC2Q8TF65 315 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 NELFBQ8WX92 580 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 FGF14Q92915 247 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 LRRC3Q9BY71 257 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 GPR88Q9GZN0 384 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 DUSP12Q9UNI6 340 aa20.71■□□□□ 0.91
LMNA-225ENST00000515824 DOCK8Q8NF50 2099 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 A8MXQ7 604 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 CDH8P55286 799 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 TCERG1LQ5VWI1 586 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 FOXR2Q6PJQ5 311 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 BMP8AQ7Z5Y6 402 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 FILIP1Q7Z7B0 1213 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 TMC8Q8IU68 726 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 ST13P5Q8NFI4 369 aaPredicted RBP20.7■□□□□ 0.9
LMNA-225ENST00000515824 TAS1R2Q8TE23 839 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 PBXIP1Q96AQ6 731 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 CEP63Q96MT8 703 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 SMOC2Q9H3U7 446 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 SMYD3Q9H7B4 428 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 METTL14Q9HCE5 456 aaKnown RBP20.7■□□□□ 0.9
LMNA-225ENST00000515824 CRTAC1Q9NQ79 661 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 ARMCX3Q9UH62 379 aaPredicted RBP20.7■□□□□ 0.9
LMNA-225ENST00000515824 NOTCH4Q99466 2003 aa20.7■□□□□ 0.9
LMNA-225ENST00000515824 A0A1W2PRU2 124 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 MOSPD3O75425 235 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 GJA1P17302 382 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 PTPN1P18031 435 aaKnown RBP20.69■□□□□ 0.9
LMNA-225ENST00000515824 GABRR2P28476 465 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 CYP27A1Q02318 531 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 PAK1Q13153 545 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 TEAD2Q15562 447 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 DCAF17Q5H9S7 520 aaPredicted RBP20.69■□□□□ 0.9
LMNA-225ENST00000515824 SCARA5Q6ZMJ2 495 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 MYLPFQ96A32 169 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 ELMO3Q96BJ8 720 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 ASIC4Q96FT7 647 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 ATXN3LQ9H3M9 355 aa20.69■□□□□ 0.9
LMNA-225ENST00000515824 CSH1P0DML2 217 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 CSH2P0DML3 217 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 SRFP11831 508 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 MAGEA11P43364 429 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 RAP1GAPP47736 663 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 MXI1P50539 228 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 DDR2Q16832 855 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 CCDC142Q17RM4 750 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 MDH1BQ5I0G3 518 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 SPOPLQ6IQ16 392 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 TTI2Q6NXR4 508 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 VSTM1Q6UX27 236 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 HFE2Q6ZVN8 426 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 FRMD5Q7Z6J6 570 aa20.68■□□□□ 0.9
LMNA-225ENST00000515824 SCN4BQ8IWT1 228 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms