RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DNM1Q05193 864 aaKnown RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 ARHGAP29Q52LW3 1261 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 LMBRD2Q68DH5 695 aaPredicted RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 MAML2Q8IZL2 1156 aaPredicted RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 OR5B17Q8NGF7 314 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 SCFD1Q8WVM8 642 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 FAM3CQ92520 227 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 RSPRY1Q96DX4 576 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 HPDLQ96IR7 371 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 TMLHEQ9NVH6 421 aa18.77■□□□□ 0.6
DDX41-217ENST00000515562 CGNQ9P2M7 1197 aaKnown RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 NDRG2Q9UN36 371 aaKnown RBP18.77■□□□□ 0.6
DDX41-217ENST00000515562 GABRDO14764 452 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
DDX41-217ENST00000515562 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 CSH1P0DML2 217 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 CSH2P0DML3 217 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 ACAT1P24752 427 aaKnown RBP18.76■□□□□ 0.59
DDX41-217ENST00000515562 DDX6P26196 483 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDX41-217ENST00000515562 RPL10AP62906 217 aaKnown RBP18.76■□□□□ 0.59
DDX41-217ENST00000515562 CYP4F8P98187 520 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 BMT2Q1RMZ1 405 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 SOWAHAQ2M3V2 549 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 CFAP221Q4G0U5 840 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 NELFCDQ8IXH7 590 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 FUBP3Q96I24 572 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDX41-217ENST00000515562 FNBP1Q96RU3 617 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 PKMYT1Q99640 499 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 PI4K2AQ9BTU6 479 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 RCOR1Q9UKL0 485 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 CACNA1IQ9P0X4 2223 aa18.76■□□□□ 0.59
DDX41-217ENST00000515562 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 AFMP43652 599 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 CYP2J2P51589 502 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 FZD5Q13467 585 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 PSMD6Q15008 389 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 C12orf56Q8IXR9 622 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 ZNF687Q8N1G0 1237 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 GOLGA5Q8TBA6 731 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 CGRRF1Q99675 332 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 CHRDQ9H2X0 955 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 C8orf33Q9H7E9 229 aaPredicted RBP18.75■□□□□ 0.59
DDX41-217ENST00000515562 PRMT8Q9NR22 394 aaPredicted RBP18.75■□□□□ 0.59
DDX41-217ENST00000515562 UXTQ9UBK9 157 aaPredicted RBP18.75■□□□□ 0.59
DDX41-217ENST00000515562 PCDHGA2Q9Y5H1 932 aa18.75■□□□□ 0.59
DDX41-217ENST00000515562 CFAP54Q96N23 3096 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 FAM186AA6NE01 2351 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 OBSL1O75147 1896 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 DLATP10515 647 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 HMGA1P17096 107 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 TNNI1P19237 187 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 CASP1P29466 404 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 AVPR1AP37288 418 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 KPNA1P52294 538 aaPredicted RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 NLRP12P59046 1061 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 CSTF1Q05048 431 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 CYP24A1Q07973 514 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 CUL4BQ13620 913 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 MAPRE1Q15691 268 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 SCARA3Q6AZY7 606 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 C4orf50Q6ZRC1 276 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 TRAPPC11Q7Z392 1133 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 LIMS2Q7Z4I7 341 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 OSTM1Q86WC4 334 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 SPATA2LQ8IUW3 424 aaPredicted RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 CELF5Q8N6W0 485 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 RDH13Q8NBN7 331 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 TRMT2BQ96GJ1 504 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 SLC39A2Q9NP94 309 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 THG1LQ9NWX6 298 aaKnown RBP18.74■□□□□ 0.59
DDX41-217ENST00000515562 GTF3C4Q9UKN8 822 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 DENND4CQ5VZ89 1909 aa18.74■□□□□ 0.59
DDX41-217ENST00000515562 KIF26AQ9ULI4 1882 aaPredicted RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 F5P12259 2224 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 RIF1Q5UIP0 2472 aaKnown RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 CLIC2O15247 247 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 F11P03951 625 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 CCNE1P24864 410 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 CYP2F1P24903 491 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 GPR15P49685 360 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 MTAPQ13126 283 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 PPP2R5DQ14738 602 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 TMEM150AQ86TG1 271 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 RALGPS2Q86X27 583 aaPredicted RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 CMTM8Q8IZV2 173 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 KBTBD7Q8WVZ9 684 aa18.73■□□□□ 0.59
DDX41-217ENST00000515562 MRPS31Q92665 395 aaKnown RBP18.73■□□□□ 0.59
DDX41-217ENST00000515562 CCDC127Q96BQ5 260 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms