RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 CCL26Q9Y258 94 aa19.82■□□□□ 0.76
SPOP-220ENST00000515508 EML5Q05BV3 1969 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 CHD8Q9HCK8 2581 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.81■□□□□ 0.76
SPOP-220ENST00000515508 HOXC13P31276 330 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 TSPY1Q01534 308 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 KCNA1Q09470 495 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 RUNX3Q13761 415 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 NFE2Q16621 373 aaPredicted RBP19.81■□□□□ 0.76
SPOP-220ENST00000515508 PKN3Q6P5Z2 889 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 DYMQ7RTS9 669 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 BRSK2Q8IWQ3 736 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 KIAA1549LQ6ZVL6 1849 aa19.81■□□□□ 0.76
SPOP-220ENST00000515508 CCDC163A0A0D9SF12 145 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 OTOL1A6NHN0 477 aaPredicted RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 TRDMT1O14717 391 aaKnown RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 EXTL3O43909 919 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 ADRB1P08588 477 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 CSH1P0DML2 217 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 CSH2P0DML3 217 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 GAP43P17677 238 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 POLR2BP30876 1174 aaKnown RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 BFSP1Q12934 665 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 ZNF268Q14587 947 aaPredicted RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 FSTL4Q6MZW2 842 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 CEP68Q76N32 757 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 PDCL2Q8N4E4 241 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 C1orf127Q8N9H9 656 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 CXorf38Q8TB03 319 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 RIN3Q8TB24 985 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 DNAJC19Q96DA6 116 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 MRPL44Q9H9J2 332 aaKnown RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 ABCB6Q9NP58 842 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 OLFML3Q9NRN5 406 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 TDP1Q9NUW8 608 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 FBXO2Q9UK22 296 aaPredicted RBP19.8■□□□□ 0.76
SPOP-220ENST00000515508 L1RE1Q9UN81 338 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 EXOC7Q9UPT5 735 aa19.8■□□□□ 0.76
SPOP-220ENST00000515508 TADA3O75528 432 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 ITGB3P05106 788 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 GPR15P49685 360 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 GRSF1Q12849 480 aaKnown RBP eCLIP19.79■□□□□ 0.76
SPOP-220ENST00000515508 TXNDC8Q6A555 127 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 TRIM68Q6AZZ1 485 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 MON1AQ86VX9 555 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 LRRC52Q8N7C0 313 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 STKLD1Q8NE28 680 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 ZSWIM2Q8NEG5 633 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 MRPS31Q92665 395 aaKnown RBP19.79■□□□□ 0.76
SPOP-220ENST00000515508 TRMT2BQ96GJ1 504 aaKnown RBP19.79■□□□□ 0.76
SPOP-220ENST00000515508 PKMYT1Q99640 499 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 ACBD6Q9BR61 282 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 FAM213AQ9BRX8 229 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 PI4K2AQ9BTU6 479 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 EBF3Q9H4W6 596 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 UXTQ9UBK9 157 aaPredicted RBP19.79■□□□□ 0.76
SPOP-220ENST00000515508 CCDC39Q9UFE4 941 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 MYO16Q9Y6X6 1858 aa19.79■□□□□ 0.76
SPOP-220ENST00000515508 ANAPC1Q9H1A4 1944 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 MYMKA6NI61 221 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 ATG13O75143 517 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 PRPF40AO75400 957 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 NOL4O94818 638 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 LDHAP00338 332 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 TFAMQ00059 246 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 PPM1JQ5JR12 505 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 INTS6LQ5JSJ4 861 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 TMEM86AQ8N2M4 240 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 SPATA18Q8TC71 538 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 GAB3Q8WWW8 586 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 LOXL4Q96JB6 756 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 MYRFLQ96LU7 910 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 ACCSQ96QU6 501 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 GDAP2Q9NXN4 497 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 DDX43Q9NXZ2 648 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 AGAP1Q9UPQ3 857 aa19.78■□□□□ 0.76
SPOP-220ENST00000515508 SRPRBQ9Y5M8 271 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 HELZP42694 1942 aaKnown RBP19.78■□□□□ 0.76
SPOP-220ENST00000515508 FRMD3A2A2Y4 597 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 GDF9O60383 454 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 HUS1O60921 280 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 GCNT3O95395 438 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 ARSAP15289 507 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 GARTP22102 1010 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 RAP1GAPP47736 663 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 CASP5P51878 434 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 RPL10AP62906 217 aaKnown RBP19.77■□□□□ 0.76
SPOP-220ENST00000515508 AMPD2Q01433 879 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 ALCAMQ13740 583 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 PDGFRLQ15198 375 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 CFAP221Q4G0U5 840 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 SV2BQ7L1I2 683 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 CACTINQ8WUQ7 758 aaKnown RBP19.77■□□□□ 0.76
SPOP-220ENST00000515508 SAAL1Q96ER3 474 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
SPOP-220ENST00000515508 RBAKQ9NYW8 714 aaPredicted RBP19.77■□□□□ 0.76
SPOP-220ENST00000515508 ITGA11Q9UKX5 1188 aa19.77■□□□□ 0.76
SPOP-220ENST00000515508 MAGED2Q9UNF1 606 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms