RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	MANSC4	A6NHS7	340 aa	Predicted RBP	5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	ZNF785	A8K8V0	405 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	PLXNC1	O60486	1568 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	GNAI3	P08754	354 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	MAL	P21145	153 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	NXPH1	P58417	271 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	PSMC1	P62191	440 aa	Known RBP	5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	GNAI1	P63096	354 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	EXOSC10	Q01780	885 aa	Known RBP	5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	TUBB3	Q13509	450 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	FAM153C	Q494X1	144 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	SLC4A10	Q6U841	1118 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	SLC30A10	Q6XR72	485 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	PTF1A	Q7RTS3	328 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	TMPRSS9	Q7Z410	1059 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	TTC7B	Q86TV6	843 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	GLCCI1	Q86VQ1	547 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	SAMD9L	Q8IVG5	1584 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	NSUN6	Q8TEA1	469 aa	Known RBP	5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	DMRTA2	Q96SC8	542 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	BRD9	Q9H8M2	597 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	EHBP1L1	Q8N3D4	1523 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	KDM5D	Q9BY66	1539 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	TNR	Q92752	1358 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	STRCP1	A6NGW2	1772 aa		5.78	□□□□□ -1.48
RUFY3-215	ENST00000515479	PLEKHH2	Q8IVE3	1493 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	PHLPP1	O60346	1717 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	CDC42BPA	Q5VT25	1732 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	DNAJC9-AS1	A6NH13	148 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	VWC2L	B2RUY7	222 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479		F5H697	171 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	FZD9	O00144	591 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	F2RL2	O00254	374 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	GABRD	O14764	452 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	KATNA1	O75449	491 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	URI1	O94763	535 aa	Predicted RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	SOX10	P56693	466 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	KRT85	P78386	507 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	FAM50A	Q14320	339 aa	Known RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	KHDC1	Q4VXA5	237 aa	Known RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	RNF187	Q5TA31	235 aa	Predicted RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	MEX3C	Q5U5Q3	659 aa	Known RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	PAPD7	Q5XG87	772 aa	Known RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	PDSS2	Q86YH6	399 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	RASAL3	Q86YV0	1011 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	SCAMP4	Q969E2	229 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	HAPLN3	Q96S86	360 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	SLC29A3	Q9BZD2	475 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	KLC4	Q9NSK0	619 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	GNL3L	Q9NVN8	582 aa	Known RBP	5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	RNF7	Q9UBF6	113 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	ROBO1	Q9Y6N7	1651 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	KAT6A	Q92794	2004 aa		5.77	□□□□□ -1.49
RUFY3-215	ENST00000515479	CASKIN1	Q8WXD9	1431 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	WDR27	A2RRH5	827 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CGB1	A6NKQ9	187 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	GJB1	P08034	283 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	RHO	P08100	348 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CDK11B	P21127	795 aa	Known RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	SMARCA1	P28370	1054 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	NDUFV1	P49821	464 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CDKN1C	P49918	316 aa	Predicted RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	ZNF135	P52742	658 aa	Predicted RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	SNAPC2	Q13487	334 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	POC1B	Q8TC44	478 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	HASPIN	Q8TF76	798 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	SMG7	Q92540	1137 aa	Known RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	NAF1	Q96HR8	494 aa	Known RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	TPSD1	Q9BZJ3	242 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	SLAMF7	Q9NQ25	335 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	SIDT1	Q9NXL6	827 aa	Known RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CFAP97	Q9P2B7	532 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	JCAD	Q9P266	1359 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	PZP	P20742	1482 aa		5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CDK12	Q9NYV4	1490 aa	Predicted RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	XIRP1	Q702N8	1843 aa	Known RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	INO80	Q9ULG1	1556 aa	Predicted RBP	5.76	□□□□□ -1.49
RUFY3-215	ENST00000515479	CROCC2	H7BZ55	1655 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	ADGRA2	Q96PE1	1338 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	NT5C1B-RDH14	C9J2C7	533 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	TRIAP1	O43715	76 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	TTLL1	O95922	423 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	ITPKB	P27987	946 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	CYP2C19	P33261	490 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	ADK	P55263	362 aa	Known RBP	5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	KRTAP10-11	P60412	298 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	PTPN21	Q16825	1174 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	FCRLB	Q6BAA4	426 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	CAMKK1	Q8N5S9	505 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	PSD4	Q8NDX1	1056 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	PBK	Q96KB5	322 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	CNPPD1	Q9BV87	410 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	SMOC2	Q9H3U7	446 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	RLIM	Q9NVW2	624 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	CCDC18	Q5T9S5	1454 aa		5.75	□□□□□ -1.49
RUFY3-215	ENST00000515479	SPATA31A3	Q5VYP0	1347 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	SYCP2	Q9BX26	1530 aa		5.74	□□□□□ -1.49
RUFY3-215	ENST00000515479	LRRC14B	A6NHZ5	514 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms