RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 P4HA1P13674 534 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 GTF2H1P32780 548 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 CCR2P41597 374 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 MAGEA11P43364 429 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 RPL10AP62906 217 aaKnown RBP13.67□□□□□ -0.22
CLCN3-210ENST00000515420 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
CLCN3-210ENST00000515420 ZNF667Q5HYK9 610 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 SV2AQ7L0J3 742 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 DNAJB7Q7Z6W7 309 aaPredicted RBP13.67□□□□□ -0.22
CLCN3-210ENST00000515420 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 FBXL6Q8N531 539 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 RSAD2Q8WXG1 361 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 FGF14Q92915 247 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 TCEAL4Q96EI5 215 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 DHTKD1Q96HY7 919 aaPredicted RBP13.67□□□□□ -0.22
CLCN3-210ENST00000515420 KCNH6Q9H252 994 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
CLCN3-210ENST00000515420 OBSL1O75147 1896 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 STX10O60499 249 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 MOSPD3O75425 235 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 CSH1P0DML2 217 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 CSH2P0DML3 217 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 MYL4P12829 197 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 COL9A1P20849 921 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 CCNE1P24864 410 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 LMO2P25791 158 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 CDC25CP30307 473 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 GNL1P36915 607 aaPredicted RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 PARM1Q6UWI2 310 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 SPATA2LQ8IUW3 424 aaPredicted RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 SUGP1Q8IWZ8 645 aaKnown RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
CLCN3-210ENST00000515420 ELSPBP1Q96BH3 223 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 ASB16Q96NS5 453 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 GTF3C4Q9UKN8 822 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
CLCN3-210ENST00000515420 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 SOBPA7XYQ1 873 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 SOAT2O75908 522 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 WEE1P30291 646 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 PIK3CAP42336 1068 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 MORC3Q14149 939 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 TAF12Q16514 161 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 ARHGAP15Q53QZ3 475 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 KRT39Q6A163 491 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 GAREM2Q75VX8 874 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 OR6B3Q8NGW1 331 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 SHKBP1Q8TBC3 707 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 MYCBPAPQ8TBZ2 947 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 SMARCD2Q92925 531 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 TRMT2BQ96GJ1 504 aaKnown RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 LPIN3Q9BQK8 851 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 PI4K2AQ9BTU6 479 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 SMOC2Q9H3U7 446 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 CRTAC1Q9NQ79 661 aa13.65□□□□□ -0.22
CLCN3-210ENST00000515420 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
CLCN3-210ENST00000515420 A0A1W2PRU2 124 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 MYBPHLA2RUH7 354 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
CLCN3-210ENST00000515420 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 FCARP24071 287 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 GABRR2P28476 465 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 NUBP1P53384 320 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
CLCN3-210ENST00000515420 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
CLCN3-210ENST00000515420 PFKPQ01813 784 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 TEAD2Q15562 447 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 CCDC150Q8NCX0 1101 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 MYLPFQ96A32 169 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 TNIP3Q96KP6 325 aa13.64□□□□□ -0.23
CLCN3-210ENST00000515420 SPATA17Q96L03 361 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms