RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DBR1Q9UK59 544 aaKnown RBP16.71■□□□□ 0.27
TRIM41-207ENST00000515223 CAPN6Q9Y6Q1 641 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 STX7O15400 261 aaKnown RBP16.71■□□□□ 0.27
TRIM41-207ENST00000515223 WEE2P0C1S8 567 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 COL9A3Q14050 684 aaPredicted RBP16.71■□□□□ 0.27
TRIM41-207ENST00000515223 VPS37AQ8NEZ2 397 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 TMEM51Q9NW97 253 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 KRT16P08779 473 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 KRT4P19013 534 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 SPRP35270 261 aaPredicted RBP16.71■□□□□ 0.27
TRIM41-207ENST00000515223 CAP2P40123 477 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 AARS2Q5JTZ9 985 aaKnown RBP16.71■□□□□ 0.27
TRIM41-207ENST00000515223 NAPEPLDQ6IQ20 393 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 C4orf22Q6V702 233 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 ZNF677Q86XU0 584 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
TRIM41-207ENST00000515223 SHPRHQ149N8 1683 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 LZTS3O60299 673 aaPredicted RBP16.71■□□□□ 0.26
TRIM41-207ENST00000515223 EPB42P16452 691 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 ETFBP38117 255 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 NPEPPSP55786 919 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 MDM1Q8TC05 714 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 ZFP42Q96MM3 310 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 TMEM117Q9H0C3 514 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 STOML1Q9UBI4 398 aa16.71■□□□□ 0.26
TRIM41-207ENST00000515223 UCHL3P15374 230 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CHRM3P20309 590 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 SERPINB4P48594 390 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CASKIN2Q8WXE0 1202 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 RPRD1AQ96P16 312 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PRR23AA6NEV1 266 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 MBL2P11226 248 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CDH2P19022 906 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 KHDRBS2Q5VWX1 349 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PRUNE1Q86TP1 453 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ELOA2Q8IYF1 753 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 DNAJC7Q99615 494 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PRPF18Q99633 342 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ADAM33Q9BZ11 813 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 MRGBPQ9NV56 204 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ATP11BQ9Y2G3 1177 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 SPACA6W5XKT8 324 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 CCDC78A2IDD5 438 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 MYBP10242 640 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 KLRC1P26715 233 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 RAD23BP54727 409 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 AP2B1P63010 937 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 TP53BP2Q13625 1128 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 LRIG3Q6UXM1 1119 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 OSBPL1AQ9BXW6 950 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PCDHB12Q9Y5F1 795 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PPP2R3BQ9Y5P8 575 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 SMAPO00193 183 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 MAP3K13O43283 966 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ITPK1Q13572 414 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PAN2Q504Q3 1202 aaKnown RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 TJAP1Q5JTD0 557 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 RFX8Q6ZV50 586 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ANO5Q75V66 913 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 LACRTQ9GZZ8 138 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 C20orf96Q9NUD7 363 aaPredicted RBP16.7■□□□□ 0.26
TRIM41-207ENST00000515223 DPP3Q9NY33 737 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 TRPM5Q9NZQ8 1165 aa16.7■□□□□ 0.26
TRIM41-207ENST00000515223 ABCA9Q8IUA7 1624 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 SUPT3HB4E1H0 165 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 F5H5T6 163 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 ITGB3P05106 788 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 POLBP06746 335 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 EPHB2P29323 1055 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 LONRF1Q17RB8 773 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 UBA3Q8TBC4 463 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 ZNF507Q8TCN5 953 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 FAM107AO95990 144 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 ATN1P54259 1190 aaPredicted RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 GALCP54803 685 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 FBXO32Q969P5 355 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 VCLP18206 1134 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 CYP11B2P19099 503 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 PLEKHA8Q96JA3 519 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 FAM161BQ96MY7 647 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 SSU72P8A0A1W2PR75 194 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 CLASP2O75122 1294 aaKnown RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 ANXA9O76027 345 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 BACE1P56817 501 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 INPP5AQ14642 412 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 EFL1Q7Z2Z2 1120 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms