RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 DMAC2Q9NW81 257 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 SIT1Q9Y3P8 196 aa26.25■■□□□ 1.79
SNF8-213ENST00000514929 NR3C1P04150 777 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 PSMC3P17980 439 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 STXBP5Q5T5C0 1151 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 GPR158Q5T848 1215 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 VITQ6UXI7 678 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 LIMS2Q7Z4I7 341 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 SPATA2LQ8IUW3 424 aaPredicted RBP26.24■■□□□ 1.79
SNF8-213ENST00000514929 DTWD2Q8NBA8 298 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 DEPDC1BQ8WUY9 529 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 KBTBD7Q8WVZ9 684 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 E2F7Q96AV8 911 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 PKMYT1Q99640 499 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 ABCB6Q9NP58 842 aa26.24■■□□□ 1.79
SNF8-213ENST00000514929 CALUO43852 315 aaPredicted RBP26.23■■□□□ 1.79
SNF8-213ENST00000514929 CYP2F1P24903 491 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 CDC25CP30307 473 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 RPL10AP62906 217 aaKnown RBP26.23■■□□□ 1.79
SNF8-213ENST00000514929 TNNC1P63316 161 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 BIRC3Q13489 604 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 WDR72Q3MJ13 1102 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 ALYREFQ86V81 257 aaKnown RBP26.23■■□□□ 1.79
SNF8-213ENST00000514929 PLEKHO2Q8TD55 490 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 PARD3BQ8TEW8 1205 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 TMEM174Q8WUU8 243 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 SYT15Q9BQS2 421 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 FOXQ1Q9C009 403 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 FAM86C1Q9NVL1 165 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 CDH9Q9ULB4 789 aa26.23■■□□□ 1.79
SNF8-213ENST00000514929 MYBPHLA2RUH7 354 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 HEPACAM2A8MVW5 462 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 CLSTN1O94985 981 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 DCNP07585 359 aaKnown RBP26.22■■□□□ 1.79
SNF8-213ENST00000514929 WARSP23381 471 aaKnown RBP26.22■■□□□ 1.79
SNF8-213ENST00000514929 LMO2P25791 158 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 GDI1P31150 447 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 GPR15P49685 360 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 AP3M2P53677 418 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 MYL6P60660 151 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 PSMC1P62191 440 aaKnown RBP26.22■■□□□ 1.79
SNF8-213ENST00000514929 CYP4F8P98187 520 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 KCNB1Q14721 858 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 CCDC142Q17RM4 750 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 CEP135Q66GS9 1140 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 PJA1Q8NG27 643 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 DNASE1L2Q92874 299 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 IRF7Q92985 503 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 SYAP1Q96A49 352 aaPredicted RBP26.22■■□□□ 1.79
SNF8-213ENST00000514929 SNX25Q9H3E2 840 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 IL21Q9HBE4 155 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 MAPK8IP1Q9UQF2 711 aa26.22■■□□□ 1.79
SNF8-213ENST00000514929 KANSL1LA0AUZ9 987 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 LRRIQ3A6PVS8 624 aaPredicted RBP26.21■■□□□ 1.79
SNF8-213ENST00000514929 ATP2C2O75185 946 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 PDGFRBP09619 1106 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 CSH1P0DML2 217 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 CSH2P0DML3 217 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 ATICP31939 592 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 DDR2Q16832 855 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 CFAP221Q4G0U5 840 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 SDHAF4Q5VUM1 108 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 C4orf50Q6ZRC1 276 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 TPRG1Q6ZUI0 275 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 ARID3BQ8IVW6 561 aaPredicted RBP26.21■■□□□ 1.79
SNF8-213ENST00000514929 MFSD6LQ8IWD5 586 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 YAF2Q8IY57 180 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 FUBP3Q96I24 572 aaKnown RBP eCLIP26.21■■□□□ 1.79
SNF8-213ENST00000514929 MRPL45Q9BRJ2 306 aaKnown RBP26.21■■□□□ 1.79
SNF8-213ENST00000514929 MKNK1Q9BUB5 465 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 HEBP1Q9NRV9 189 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 NXF1Q9UBU9 619 aaKnown RBP26.21■■□□□ 1.79
SNF8-213ENST00000514929 MAGED2Q9UNF1 606 aaPredicted RBP26.21■■□□□ 1.79
SNF8-213ENST00000514929 TRAF3IP3Q9Y228 551 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 FRMD4BQ9Y2L6 1034 aa26.21■■□□□ 1.79
SNF8-213ENST00000514929 STAU1O95793 577 aaKnown RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 MRE11P49959 708 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 UBXN2BQ14CS0 331 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 MAPRE1Q15691 268 aaKnown RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 TDRD10Q5VZ19 366 aaKnown RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 FAM171BQ6P995 826 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 GPIHBP1Q8IV16 184 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 SCN4BQ8IWT1 228 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 GUF1Q8N442 669 aaKnown RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 STKLD1Q8NE28 680 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 OR6B3Q8NGW1 331 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 PHOX2BQ99453 314 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 DDX23Q9BUQ8 820 aaKnown RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 TASP1Q9H6P5 420 aa26.2■■□□□ 1.78
SNF8-213ENST00000514929 MAGEC2Q9UBF1 373 aaPredicted RBP26.2■■□□□ 1.78
SNF8-213ENST00000514929 COL4A3Q01955 1670 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 DPYSL4O14531 572 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 ZNF263O14978 683 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 TACC1O75410 805 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 HMGA1P17096 107 aaKnown RBP26.19■■□□□ 1.78
SNF8-213ENST00000514929 CD72P21854 359 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 GNL1P36915 607 aaPredicted RBP26.19■■□□□ 1.78
SNF8-213ENST00000514929 CLDN10P78369 228 aa26.19■■□□□ 1.78
SNF8-213ENST00000514929 FMR1NBQ8N0W7 255 aaPredicted RBP26.19■■□□□ 1.78
SNF8-213ENST00000514929 MYLPFQ96A32 169 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms