RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
HMGXB3-205ENST00000514469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 FAM237AA0A1B0GTK4 181 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 FAM170BA6NMN3 283 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 HCRTO43612 131 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CACNA1HO95180 2353 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 PRAMEF12O95522 483 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 HMGA1P17096 107 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 PCSK1P29120 753 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 LHX1P48742 406 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 GPR15P49685 360 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 KRT85P78386 507 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CYP4F8P98187 520 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CCDC142Q17RM4 750 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 KNOP1Q1ED39 458 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 GPR158Q5T848 1215 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 TMEM150AQ86TG1 271 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 ARID3BQ8IVW6 561 aaPredicted RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 GIPC2Q8TF65 315 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 TMEM174Q8WUU8 243 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 SPATA32Q96LK8 384 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 NELL2Q99435 816 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 TASP1Q9H6P5 420 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 EXOC1Q9NV70 894 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 OBP2AQ9NY56 170 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 USP25Q9UHP3 1055 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 KIF26AQ9ULI4 1882 aaPredicted RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
HMGXB3-205ENST00000514469 FRYLO94915 3013 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 A0A1B0GVL5 298 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 MAN2B1O00754 1011 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 ZNF263O14978 683 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 CHADO15335 359 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 NOL4O94818 638 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 MYL1P05976 194 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 SP9P0CG40 484 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 CSH1P0DML2 217 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 CSH2P0DML3 217 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 DLATP10515 647 aaKnown RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 CYP2F1P24903 491 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 MLLT6P55198 1093 aaPredicted RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 STK4Q13043 487 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 PSMD2Q13200 908 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 FZD5Q13467 585 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 TAF12Q16514 161 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 FAM171BQ6P995 826 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 STKLD1Q8NE28 680 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 NKD2Q969F2 451 aaPredicted RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 FNBP1Q96RU3 617 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 SYT15Q9BQS2 421 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 ZMYM5Q9UJ78 669 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 GTF3C4Q9UKN8 822 aa11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
HMGXB3-205ENST00000514469 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.62
HMGXB3-205ENST00000514469 TICRRQ7Z2Z1 1910 aa11.21□□□□□ -0.62
HMGXB3-205ENST00000514469 ZFHX2Q9C0A1 2572 aaPredicted RBP11.21□□□□□ -0.62
HMGXB3-205ENST00000514469 CFAP54Q96N23 3096 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 MYBPHLA2RUH7 354 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 DPYSL4O14531 572 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 NCAM2O15394 837 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 EXOC3O60645 756 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 TACC1O75410 805 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 TADA3O75528 432 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 STAU1O95793 577 aaKnown RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 F11P03951 625 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 TNNI1P19237 187 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 LMO2P25791 158 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 DDX6P26196 483 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 MAGEA11P43364 429 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 NLRP12P59046 1061 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 RPL10AP62906 217 aaKnown RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 ZNF528Q3MIS6 628 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 SDHAF4Q5VUM1 108 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 SPATA2LQ8IUW3 424 aaPredicted RBP11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 SLC9A9Q8IVB4 645 aa11.2□□□□□ -0.62
HMGXB3-205ENST00000514469 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms