RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 NLRP14Q86W24 1093 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 KIAA0319LQ8IZA0 1049 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 CCDC89Q8N998 374 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 JOSD2Q8TAC2 188 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 MYCBPAPQ8TBZ2 947 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 RAPGEF5Q92565 580 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 TMEM176AQ96HP8 235 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 MAML3Q96JK9 1138 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 CPXM1Q96SM3 734 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.02
CPNE4-211ENST00000514439 ANAPC5Q9UJX4 755 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 DNPEPQ9ULA0 475 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 AGAP1Q9UPQ3 857 aa8.65□□□□□ -1.02
CPNE4-211ENST00000514439 hCG_1818297A0A087WSY0 165 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 LRRD1A4D1F6 860 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 E7EVH7 732 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 TULP2O00295 520 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 RASGRF2O14827 1237 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 MICAL2O94851 1124 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 TJP3O95049 919 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 ERBB2P04626 1255 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 KRT3P12035 628 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 PTPN7P35236 360 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 COPS2P61201 443 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 PSMC1P62191 440 aaKnown RBP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 IFI35P80217 286 aaPredicted RBP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 KYAT1Q16773 422 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 GSTA5Q7RTV2 222 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 CROCCP2Q86T23 111 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 XYLT1Q86Y38 959 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 OR6J1Q8NGC5 347 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 HPDLQ96IR7 371 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 TSPYL1Q9H0U9 437 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 SYNCQ9H7C4 482 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 CNOT10Q9H9A5 744 aaKnown RBP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 CYP3A43Q9HB55 503 aa8.65□□□□□ -1.03
CPNE4-211ENST00000514439 DDX56Q9NY93 547 aaKnown RBP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.65□□□□□ -1.03
CPNE4-211ENST00000514439 A0A1B0GUA9 196 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ANKRD65E5RJM6 399 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 M0QYV0 167 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ADCY6O43306 1168 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 TRAPPC3O43617 180 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 LRCH4O75427 683 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 FAM107AO95990 144 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 AGTP01019 485 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 P4HA1P13674 534 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 CDKN2BP42772 138 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 GSCP56915 257 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 SLC25A11Q02978 314 aaKnown RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 AUHQ13825 339 aaKnown RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 KIZQ2M2Z5 673 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 TFDP3Q5H9I0 405 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 IZUMO3Q5VZ72 239 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 POLNQ7Z5Q5 900 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ARFGAP1Q8N6T3 406 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 EMC1Q8N766 993 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 GLIS1Q8NBF1 620 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 MDM1Q8TC05 714 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 FNIP1Q8TF40 1166 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ZNF473Q8WTR7 871 aaKnown RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 HAUS1Q96CS2 278 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 PWWP2AQ96N64 755 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ACAP3Q96P50 834 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 CCT8L2Q96SF2 557 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 METTL5Q9NRN9 209 aaKnown RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ITGA11Q9UKX5 1188 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 C2CD2Q9Y426 696 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 SCN4AP35499 1836 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 C3orf70A6NLC5 250 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 TTC4O95801 387 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 IL1R2P27930 398 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 MMP13P45452 471 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 LMNB2Q03252 620 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ACVR2BQ13705 512 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 DGKDQ16760 1214 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 LONRF1Q17RB8 773 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 P3H1Q32P28 736 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 TNFAIP8L3Q5GJ75 292 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 MFSD5Q6N075 450 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 DRICH1Q6PGQ1 229 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ZNF410Q86VK4 478 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 BBOF1Q8ND07 529 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 SELENOSQ9BQE4 189 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ABHD16BQ9H3Z7 469 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ZWILCHQ9H900 591 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 SETD4Q9NVD3 440 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 DPP3Q9NY33 737 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 WDR35Q9P2L0 1181 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 BARX2Q9UMQ3 279 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-211ENST00000514439 ZNF148Q9UQR1 794 aa8.64□□□□□ -1.03
CPNE4-211ENST00000514439 GMNCA6NCL1 334 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms