RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 UBXN2BQ14CS0 331 aa14□□□□□ -0.17
DDR1-275ENST00000514434 NFE2Q16621 373 aaPredicted RBP14□□□□□ -0.17
DDR1-275ENST00000514434 DDR2Q16832 855 aa14□□□□□ -0.17
DDR1-275ENST00000514434 CEP135Q66GS9 1140 aa14□□□□□ -0.17
DDR1-275ENST00000514434 VITQ6UXI7 678 aa14□□□□□ -0.17
DDR1-275ENST00000514434 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
DDR1-275ENST00000514434 C12orf56Q8IXR9 622 aa14□□□□□ -0.17
DDR1-275ENST00000514434 DTWD2Q8NBA8 298 aa14□□□□□ -0.17
DDR1-275ENST00000514434 PLEKHO2Q8TD55 490 aa14□□□□□ -0.17
DDR1-275ENST00000514434 ELMO3Q96BJ8 720 aa14□□□□□ -0.17
DDR1-275ENST00000514434 SHDQ96IW2 340 aa14□□□□□ -0.17
DDR1-275ENST00000514434 TRMT61BQ9BVS5 477 aaKnown RBP14□□□□□ -0.17
DDR1-275ENST00000514434 GZF1Q9H116 711 aaPredicted RBP14□□□□□ -0.17
DDR1-275ENST00000514434 KCTD10Q9H3F6 313 aa14□□□□□ -0.17
DDR1-275ENST00000514434 BRD9Q9H8M2 597 aa14□□□□□ -0.17
DDR1-275ENST00000514434 HEBP1Q9NRV9 189 aa14□□□□□ -0.17
DDR1-275ENST00000514434 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
DDR1-275ENST00000514434 MAGED2Q9UNF1 606 aaPredicted RBP14□□□□□ -0.17
DDR1-275ENST00000514434 SIT1Q9Y3P8 196 aa14□□□□□ -0.17
DDR1-275ENST00000514434 NCANO14594 1321 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 HEPACAM2A8MVW5 462 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 NR3C1P04150 777 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 PSMC3P17980 439 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 PCSK1P29120 753 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 MRE11P49959 708 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 NUBP1P53384 320 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 TNNC1P63316 161 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 NUCB2P80303 420 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 DPYDQ12882 1025 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 ARHGAP15Q53QZ3 475 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 TPRG1Q6ZUI0 275 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 ARID3BQ8IVW6 561 aaPredicted RBP13.99□□□□□ -0.17
DDR1-275ENST00000514434 SCN4BQ8IWT1 228 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 CCDC105Q8IYK2 499 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 OR6B3Q8NGW1 331 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 KBTBD7Q8WVZ9 684 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 RSPRY1Q96DX4 576 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 GCNAQ96QF7 691 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 SYT15Q9BQS2 421 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 MRPL45Q9BRJ2 306 aaKnown RBP13.99□□□□□ -0.17
DDR1-275ENST00000514434 GPR88Q9GZN0 384 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 SMG9Q9H0W8 520 aaKnown RBP13.99□□□□□ -0.17
DDR1-275ENST00000514434 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
DDR1-275ENST00000514434 MTF2Q9Y483 593 aaPredicted RBP13.99□□□□□ -0.17
DDR1-275ENST00000514434 CACNA1IQ9P0X4 2223 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 KANSL1LA0AUZ9 987 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 LRRIQ3A6PVS8 624 aaPredicted RBP13.98□□□□□ -0.17
DDR1-275ENST00000514434 PDXKO00764 312 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 DPYSL4O14531 572 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 GABRDO14764 452 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 CALUO43852 315 aaPredicted RBP13.98□□□□□ -0.17
DDR1-275ENST00000514434 FGF19O95750 216 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 CDC25CP30307 473 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
DDR1-275ENST00000514434 STARD6P59095 220 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 DLG4P78352 724 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 DPH6Q7L8W6 267 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
DDR1-275ENST00000514434 PJA1Q8NG27 643 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 PKMYT1Q99640 499 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 IL21Q9HBE4 155 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 DMAC2Q9NW81 257 aa13.98□□□□□ -0.17
DDR1-275ENST00000514434 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
DDR1-275ENST00000514434 PTPRZ1P23471 2315 aaPredicted RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 ZNF263O14978 683 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 HMGA1P17096 107 aaKnown RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 WARSP23381 471 aaKnown RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 GNL1P36915 607 aaPredicted RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 RPL10AP62906 217 aaKnown RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 PRKCQQ04759 706 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 PNOCQ13519 176 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 ANGPT1Q15389 498 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 TDRD10Q5VZ19 366 aaKnown RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 MFSD6LQ8IWD5 586 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 SPATA18Q8TC71 538 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 PARD3BQ8TEW8 1205 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 IRF7Q92985 503 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 MYLPFQ96A32 169 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 MKNK1Q9BUB5 465 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 IRF2BPLQ9H1B7 796 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 TRPV4Q9HBA0 871 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 CRTAC1Q9NQ79 661 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.17
DDR1-275ENST00000514434 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
DDR1-275ENST00000514434 CDH9Q9ULB4 789 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 FRMD4BQ9Y2L6 1034 aa13.97□□□□□ -0.17
DDR1-275ENST00000514434 RIF1Q5UIP0 2472 aaKnown RBP13.96□□□□□ -0.17
DDR1-275ENST00000514434 SLC38A8A6NNN8 435 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 KIF20AO95235 890 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 PRAMEF12O95522 483 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 CSH1P0DML2 217 aa13.96□□□□□ -0.17
DDR1-275ENST00000514434 CSH2P0DML3 217 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms