RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ENC1O14682 589 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 RIOK3O14730 519 aaKnown RBP16.94■□□□□ 0.3
NUP54-214ENST00000514307 SLU7O95391 586 aaKnown RBP16.94■□□□□ 0.3
NUP54-214ENST00000514307 CYP11A1P05108 521 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 FGFR1P11362 822 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 TYMPP19971 482 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 GPD2P43304 727 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 OR1G1P47890 313 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 DSC1Q08554 894 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 TIGD5Q53EQ6 642 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 PLEKHA7Q6IQ23 1121 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 C11orf63Q6NUN7 778 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 MMS22LQ6ZRQ5 1243 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 COLGALT2Q8IYK4 626 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 LRRC57Q8N9N7 239 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 FEZF2Q8TBJ5 459 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
NUP54-214ENST00000514307 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
NUP54-214ENST00000514307 PBKQ96KB5 322 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 C11orf70Q9BRQ4 267 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 DDX43Q9NXZ2 648 aaKnown RBP16.94■□□□□ 0.3
NUP54-214ENST00000514307 PRKAG2Q9UGJ0 569 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 HMGXB4Q9UGU5 601 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 SNX12Q9UMY4 172 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 FAN1Q9Y2M0 1017 aa16.94■□□□□ 0.3
NUP54-214ENST00000514307 MIF4GDA9UHW6 222 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 BUB1BO60566 1050 aaPredicted RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 DDHD2O94830 711 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 AMHP03971 560 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 RRM1P23921 792 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 LMO2P25791 158 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 SSTR3P32745 418 aaPredicted RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 SLC1A1P43005 524 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 PAFAH1B1P43034 410 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 ORC1Q13415 861 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 MAPRE1Q15691 268 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 CLUL1Q15846 466 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 GOLGA7BQ2TAP0 167 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 UBL4BQ8N7F7 174 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 C1orf131Q8NDD1 294 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 UBA3Q8TBC4 463 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 CASD1Q96PB1 797 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 ACBD6Q9BR61 282 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 OSGEPQ9NPF4 335 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 CYLDQ9NQC7 956 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 PRDM5Q9NQX1 630 aaPredicted RBP16.93■□□□□ 0.3
NUP54-214ENST00000514307 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 MRFAP1Q9Y605 127 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 ALG6Q9Y672 507 aa16.93■□□□□ 0.3
NUP54-214ENST00000514307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.92■□□□□ 0.3
NUP54-214ENST00000514307 CES2O00748 559 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 ACADSBP45954 432 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 GABRB2P47870 512 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 ELAVL2Q12926 359 aaKnown RBP16.92■□□□□ 0.3
NUP54-214ENST00000514307 PTP4A2Q12974 167 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 MESDQ14696 234 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 PPP1R26Q5T8A7 1209 aaPredicted RBP16.92■□□□□ 0.3
NUP54-214ENST00000514307 DNAJC24Q6P3W2 148 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 DCUN1D2Q6PH85 259 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 ZDHHC17Q8IUH5 632 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 CRIPAKQ8N1N5 446 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 B3GALNT2Q8NCR0 500 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 MYRIPQ8NFW9 859 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 ABCB6Q9NP58 842 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 IP6K2Q9UHH9 426 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 COG5Q9UP83 839 aa16.92■□□□□ 0.3
NUP54-214ENST00000514307 SIGLEC16A6NMB1 481 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 FTCDO95954 541 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 BCAT1P54687 386 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 PSMC1P62191 440 aaKnown RBP16.91■□□□□ 0.3
NUP54-214ENST00000514307 AMPD2Q01433 879 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 BST2Q10589 180 aaKnown RBP16.91■□□□□ 0.3
NUP54-214ENST00000514307 CCDC181Q5TID7 509 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 C3orf20Q8ND61 904 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
NUP54-214ENST00000514307 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 HSFY1Q96LI6 401 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 OSBPL9Q96SU4 736 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 PAAF1Q9BRP4 392 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
NUP54-214ENST00000514307 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.91■□□□□ 0.3
NUP54-214ENST00000514307 TMEM191CA6NGB0 347 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 NRP1O14786 923 aa16.9■□□□□ 0.3
NUP54-214ENST00000514307 SYN3O14994 580 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms