RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	ATIC	P31939	592 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ELF1	P32519	619 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	KRT9	P35527	623 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ADD2	P35612	726 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RXRG	P48443	463 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PTDSS1	P48651	473 aa	Known RBP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PTTG1IP	P53801	180 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	EIF5	P55010	431 aa	Known RBP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TCF15	Q12870	199 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM110C	Q1W6H9	321 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SLC5A9	Q2M3M2	681 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM214A	Q32MH5	1076 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PLA1A	Q53H76	456 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM26F	Q5R3K3	315 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAXC	Q5TGI0	409 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	MRNIP	Q6NTE8	343 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	FAM180B	Q6P0A1	224 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PPP1R32	Q7Z5V6	425 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	GAS2L3	Q86XJ1	694 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	PDPR	Q8NCN5	879 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SIMC1	Q8NDZ2	872 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SHCBP1	Q8NEM2	672 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	TFAP2C	Q92754	450 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	RILPL2	Q969X0	211 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	BORCS6	Q96GS4	357 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	LCOR	Q96JN0	433 aa	Predicted RBP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	SEPSECS	Q9HD40	501 aa	Known RBP	5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	UBN1	Q9NPG3	1134 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	CA14	Q9ULX7	337 aa		5.78	□□□□□ -1.48
CALCOCO2-222	ENST00000514006	ITIH6	Q6UXX5	1313 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SH3D21	A4FU49	640 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	AQP7P3	A6NL99	342 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006		B9A039	149 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006		E9PLN8	166 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	COQ9	O75208	318 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	VPS4B	O75351	444 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	RNASEH2A	O75792	299 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SOAT2	O75908	522 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	CD4	P01730	458 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ITGB1	P05556	798 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	GYS1	P13807	737 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	PECAM1	P16284	738 aa	Predicted RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ALDH18A1	P54886	795 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	AP2B1	P63010	937 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SATB1	Q01826	763 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	EFR3A	Q14156	821 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	IQCB1	Q15051	598 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	NPY5R	Q15761	445 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	TRIM71	Q2Q1W2	868 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	VWA3B	Q502W6	1294 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	FCRL6	Q6DN72	434 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	DOK3	Q7L591	496 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ADAMTS17	Q8TE56	1095 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	THAP4	Q8WY91	577 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	HDAC2	Q92769	488 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	VKORC1	Q9BQB6	163 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	MESP1	Q9BRJ9	268 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	TTYH3	Q9C0H2	523 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	C12orf65	Q9H3J6	166 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	FAM83D	Q9H4H8	585 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ZBTB26	Q9HCK0	441 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	MRPS18A	Q9NVS2	196 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	DKK4	Q9UBT3	224 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	FEM1B	Q9UK73	627 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ATP11B	Q9Y2G3	1177 aa		5.77	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	CARMIL2	Q6F5E8	1435 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	DYTN	A2CJ06	578 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006		A6NLC8	198 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	PRR5-ARHGAP8	B1AHC4	643 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	TISP43	B9A030	160 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	HOXC11	O43248	304 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	IFIT1	P09914	478 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SLC6A2	P23975	617 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	CAP1	Q01518	475 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	KRT17	Q04695	432 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	TLE2	Q04725	743 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	MGAT5B	Q3V5L5	792 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	VPS53	Q5VIR6	699 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	CACHD1	Q5VU97	1274 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	EFCAB12	Q6NXP0	572 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	FAM83A	Q86UY5	434 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	KRTAP1-3	Q8IUG1	177 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	HERC6	Q8IVU3	1022 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	CARF	Q8N187	725 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	RNF169	Q8NCN4	708 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	AFG1L	Q8WV93	481 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	HERVK_113	Q902F9	699 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	MBD6	Q96DN6	1003 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	MAEL	Q96JY0	434 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	ZNF512	Q96ME7	567 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SLC46A1	Q96NT5	459 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	SMO	Q99835	787 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	RTKN	Q9BST9	563 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	DDX23	Q9BUQ8	820 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	PABPC3	Q9H361	631 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	TP63	Q9H3D4	680 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	PRDM8	Q9NQV8	689 aa		5.76	□□□□□ -1.49
CALCOCO2-222	ENST00000514006	HELLS	Q9NRZ9	838 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms