RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 EXD1Q8NHP7 514 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 FNIP1Q8TF40 1166 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 WNT8BQ93098 351 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 MRPL45Q9BRJ2 306 aaKnown RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 TRIM51Q9BSJ1 452 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 CFHR5Q9BXR6 569 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 SENP6Q9GZR1 1112 aaPredicted RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 LRRC19Q9H756 370 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 MED4Q9NPJ6 270 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 KLK14Q9P0G3 267 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 TJP2Q9UDY2 1190 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 FAM153AQ9UHL3 310 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 ERBB2P04626 1255 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 ASGR1P07306 291 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 PNPLA4P41247 253 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 MGAT3Q09327 533 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 HLTFQ14527 1009 aaKnown RBP eCLIP15.8■□□□□ 0.12
VCAN-211ENST00000513984 FBXO47Q5MNV8 452 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 DUPD1Q68J44 220 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 TTC27Q6P3X3 843 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
VCAN-211ENST00000513984 UNC93AQ86WB7 457 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 DDX42Q86XP3 938 aaKnown RBP eCLIP15.8■□□□□ 0.12
VCAN-211ENST00000513984 CAPNS2Q96L46 248 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 ERP44Q9BS26 406 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 RNF186Q9NXI6 227 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 GDAP2Q9NXN4 497 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 RASAL2Q9UJF2 1139 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
VCAN-211ENST00000513984 CENPFP49454 3210 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 DAPK3O43293 454 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 RPS6KA5O75582 802 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 KRT3P12035 628 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 COILP38432 576 aaPredicted RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 DRG2P55039 364 aaKnown RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 PSMC1P62191 440 aaKnown RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 GABPB1Q06547 395 aaPredicted RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 SOX4Q06945 474 aaPredicted RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 TSEN2Q8NCE0 465 aaKnown RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 ARRDC4Q8NCT1 418 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 FAM71BQ8TC56 605 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 MCRS1Q96EZ8 462 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 TSPAN16Q9UKR8 245 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 NME7Q9Y5B8 376 aa15.79■□□□□ 0.12
VCAN-211ENST00000513984 TDRD15B5MCY1 1934 aaKnown RBP15.79■□□□□ 0.12
VCAN-211ENST00000513984 F8VP50 259 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 PODXLO00592 558 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 TOMM70O94826 608 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 CHRNA1P02708 482 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 ELNP15502 786 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 KLF1Q13351 362 aaPredicted RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 KCNA10Q16322 511 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 HSP90B2PQ58FF3 399 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 LIMS2Q7Z4I7 341 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 SLCO2A1Q92959 643 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 HERPUD2Q9BSE4 406 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 NEUROG2Q9H2A3 272 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 SYNCQ9H7C4 482 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 CHST12Q9NRB3 414 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 GOLGA6BA6NDN3 693 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 KPNA7A9QM74 516 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 GOLGA8SH3BPF8 625 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 AGPSO00116 658 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 PFKMP08237 780 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 TCF4P15884 667 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 LRPAP1P30533 357 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 RFC1P35251 1148 aaPredicted RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 HSPA9P38646 679 aaKnown RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 TAF6P49848 677 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 DEFB115Q30KQ5 88 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 PKDCCQ504Y2 493 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 MAP3K21Q5TCX8 1036 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 ALS2CLQ60I27 953 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 C12orf29Q8N999 325 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 PCSK9Q8NBP7 692 aaKnown RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 JOSD2Q8TAC2 188 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 IPO4Q8TEX9 1081 aaKnown RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 RBM41Q96IZ5 413 aaKnown RBP15.78■□□□□ 0.12
VCAN-211ENST00000513984 MIS12Q9H081 205 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 SRRDQ9UH36 339 aa15.78■□□□□ 0.12
VCAN-211ENST00000513984 GRIN2DO15399 1336 aa15.77■□□□□ 0.12
VCAN-211ENST00000513984 PTGESO14684 152 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 SYF2O95926 243 aaKnown RBP15.77■□□□□ 0.11
VCAN-211ENST00000513984 CTSHP09668 335 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 SETSIPP0DME0 302 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 RALAP11233 206 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 SSR1P43307 286 aaKnown RBP15.77■□□□□ 0.11
VCAN-211ENST00000513984 GOLGA7BQ2TAP0 167 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 SV2CQ496J9 727 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 PPP1R26Q5T8A7 1209 aaPredicted RBP15.77■□□□□ 0.11
VCAN-211ENST00000513984 POLNQ7Z5Q5 900 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 ACOT1Q86TX2 421 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 CCDC50Q8IVM0 306 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 RCOR2Q8IZ40 523 aa15.77■□□□□ 0.11
VCAN-211ENST00000513984 UBA3Q8TBC4 463 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms