RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MYRFLQ96LU7 910 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 CEP295NLQ96MC4 621 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 CORO1BQ9BR76 489 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 ZNF334Q9HCZ1 680 aaPredicted RBP10.4□□□□□ -0.74
RNF4-221ENST00000513643 SLC2A4RGQ9NR83 387 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 KIAA1468Q9P260 1216 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 GTF3C4Q9UKN8 822 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 POLIQ9UNA4 740 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 COQ4Q9Y3A0 265 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 MRPS23Q9Y3D9 190 aaKnown RBP10.4□□□□□ -0.74
RNF4-221ENST00000513643 PCDHB5Q9Y5E4 795 aa10.4□□□□□ -0.74
RNF4-221ENST00000513643 F5P12259 2224 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 CETN3O15182 167 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 PMM2O15305 246 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 SLC16A3O15427 465 aaKnown RBP10.39□□□□□ -0.75
RNF4-221ENST00000513643 ATP2C2O75185 946 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ECI2O75521 394 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 SOAT2O75908 522 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ACAT1P24752 427 aaKnown RBP10.39□□□□□ -0.75
RNF4-221ENST00000513643 GNL1P36915 607 aaPredicted RBP10.39□□□□□ -0.75
RNF4-221ENST00000513643 PPP1R2P41236 205 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ALDH1A3P47895 512 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 TSPY1Q01534 308 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 TRPC3Q13507 836 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 IQCEQ6IPM2 695 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 CRYBG2Q8N1P7 616 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 TRIML1Q8N9V2 468 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 MYCBPAPQ8TBZ2 947 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ASB16Q96NS5 453 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 MED15Q96RN5 788 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 SYT15Q9BQS2 421 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 BCO2Q9BYV7 579 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
RNF4-221ENST00000513643 TMEM8AQ9HCN3 771 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 WNT16Q9UBV4 365 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 ARIH1Q9Y4X5 557 aaPredicted RBP10.39□□□□□ -0.75
RNF4-221ENST00000513643 NUMBLQ9Y6R0 609 aa10.39□□□□□ -0.75
RNF4-221ENST00000513643 PIEZO1Q92508 2521 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TRIM49BA6NDI0 452 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 SOBPA7XYQ1 873 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 LRRN2O75325 713 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 NOL4O94818 638 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 HLA-DRAP01903 254 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 F11P03951 625 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 SRFP11831 508 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 NPR3P17342 541 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 PTPN1P18031 435 aaKnown RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 CYP2F1P24903 491 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 ASPAP45381 313 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 GCLMP48507 274 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 CDH8P55286 799 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 INCA1Q0VD86 236 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 MAPRE1Q15691 268 aaKnown RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 FAM78AQ5JUQ0 283 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 VSTM1Q6UX27 236 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 PAQR9Q6ZVX9 377 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 MTSS1LQ765P7 747 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 PDZD4Q76G19 769 aaPredicted RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 FILIP1Q7Z7B0 1213 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 ITIH5Q86UX2 942 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 ELMOD1Q8N336 334 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TAS1R2Q8TE23 839 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 SEMA4DQ92854 862 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 ELSPBP1Q96BH3 223 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 MCRS1Q96EZ8 462 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 EEF2KMTQ96G04 330 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 SPATA17Q96L03 361 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 CEP63Q96MT8 703 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
RNF4-221ENST00000513643 MMS19Q96T76 1030 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 LPIN3Q9BQK8 851 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 PI4K2AQ9BTU6 479 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 PLA2G2FQ9BZM2 168 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 SMYD3Q9H7B4 428 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 ASAH2Q9NR71 780 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 TMEM30AQ9NV96 361 aa10.38□□□□□ -0.75
RNF4-221ENST00000513643 SHISA7A6NL88 538 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 PSMA7O14818 248 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 PHACTR2O75167 634 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 FGF19O95750 216 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 PDGFRBP09619 1106 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 GPR15P49685 360 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
RNF4-221ENST00000513643 TNNC1P63316 161 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 BIRC3Q13489 604 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 TEAD2Q15562 447 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 DDR2Q16832 855 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 ZNF699Q32M78 642 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 MGAT5BQ3V5L5 792 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 ZNF667Q5HYK9 610 aa10.37□□□□□ -0.75
RNF4-221ENST00000513643 KRT39Q6A163 491 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms