RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 SYCP3Q8IZU3 236 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 LOXL4Q96JB6 756 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 TMEM209Q96SK2 561 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 LPIN3Q9BQK8 851 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 RBAKQ9NYW8 714 aaPredicted RBP11.81□□□□□ -0.52
SKP2-207ENST00000513263 SRPRBQ9Y5M8 271 aaKnown RBP11.81□□□□□ -0.52
SKP2-207ENST00000513263 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 NCANO14594 1321 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
SKP2-207ENST00000513263 MED19A0JLT2 244 aaPredicted RBP11.8□□□□□ -0.52
SKP2-207ENST00000513263 PRAMEF12O95522 483 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 DRD1P21728 446 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 STAT6P42226 847 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 NLRP12P59046 1061 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
SKP2-207ENST00000513263 PON2Q15165 354 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 CSRP2Q16527 193 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 CFAP221Q4G0U5 840 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 ZC2HC1CQ53FD0 456 aaPredicted RBP11.8□□□□□ -0.52
SKP2-207ENST00000513263 WSCD1Q658N2 575 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 CEP68Q76N32 757 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 DPH6Q7L8W6 267 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 WDR5BQ86VZ2 330 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 CPA6Q8N4T0 437 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 CAMKK1Q8N5S9 505 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 TTC9BQ8N6N2 239 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 ACDQ96AP0 544 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 RSPRY1Q96DX4 576 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 IL21Q9HBE4 155 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 KIAA1586Q9HCI6 787 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 TDP1Q9NUW8 608 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 GTSE1Q9NYZ3 720 aa11.8□□□□□ -0.52
SKP2-207ENST00000513263 TRAV19A0A0A6YYK7 116 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 FRMD3A2A2Y4 597 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 ANKRD63C9JTQ0 380 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 K7ESF4 209 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 SLC30A4O14863 429 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 EXTL3O43909 919 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 ITGB3P05106 788 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 ATXN1P54253 815 aaKnown RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 RBP5P82980 135 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 CYP4F8P98187 520 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 AMPD3Q01432 767 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 FAM160A1Q05DH4 1040 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 SPEM2Q0P670 501 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 RUNX3Q13761 415 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 PRR23CQ6ZRP0 262 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 DYMQ7RTS9 669 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 C11orf74Q86VG3 221 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 ATP2A3Q93084 1043 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 MYRFLQ96LU7 910 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 FAM83CQ9BQN1 747 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 FAM213AQ9BRX8 229 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 STRA6Q9BX79 667 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 CUEDC2Q9H467 287 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 ZSCAN16Q9H4T2 348 aaPredicted RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 SEMA4GQ9NTN9 838 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 GDAP2Q9NXN4 497 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 DDX43Q9NXZ2 648 aaKnown RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
SKP2-207ENST00000513263 SLC8A2Q9UPR5 921 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 PLXND1Q9Y4D7 1925 aa11.79□□□□□ -0.52
SKP2-207ENST00000513263 THADAQ6YHU6 1953 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
SKP2-207ENST00000513263 SOAT2O75908 522 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 NOL4O94818 638 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 TNNC2P02585 160 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 CKMP06732 381 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 USP17L7P0C7H9 530 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
SKP2-207ENST00000513263 IDEP14735 1019 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 TCF3P15923 654 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 ADSSP30520 456 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 MAGEA11P43364 429 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 SOX9P48436 509 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 PPP3CCP48454 512 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 LIMK1P53667 647 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 NR1H3Q13133 447 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 CUL4AQ13619 759 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 GAS6Q14393 721 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 TXNDC11Q6PKC3 985 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 CRELD2Q6UXH1 353 aaPredicted RBP11.78□□□□□ -0.52
SKP2-207ENST00000513263 Q6ZS52 159 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms