RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PSMD5Q16401 504 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 INTS6LQ5JSJ4 861 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 PPP2R2DQ66LE6 453 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 ZNF677Q86XU0 584 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 TMEM139Q8IV31 216 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 C12orf29Q8N999 325 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 TFAP2BQ92481 460 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 DDX1Q92499 740 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 PKMYT1Q99640 499 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 CHP1Q99653 195 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 SYT11Q9BT88 431 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
PDPN-210ENST00000513143 MTUS1Q9ULD2 1270 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 PTPRDP23468 1912 aa13.33□□□□□ -0.28
PDPN-210ENST00000513143 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 H3BNC9 293 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 THAP12O43422 761 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 URODP06132 367 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CD19P15391 556 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CHRNB2P17787 502 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 PSMC1P62191 440 aaKnown RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 TSPY1Q01534 308 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CDR2Q01850 454 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CNGA2Q16280 664 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 TDRD12Q587J7 1177 aaKnown RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 ARHGAP17Q68EM7 881 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 RSPO2Q6UXX9 243 aaPredicted RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 MYCBPAPQ8TBZ2 947 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 POF1BQ8WVV4 589 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 TIFAQ96CG3 184 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 BAG1Q99933 345 aaPredicted RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 AGPAT1Q99943 283 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 LPIN3Q9BQK8 851 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 MRPL17Q9NRX2 175 aaKnown RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 PCDHGC3Q9UN70 934 aa13.32□□□□□ -0.28
PDPN-210ENST00000513143 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
PDPN-210ENST00000513143 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 O00370 1275 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 C2CD2LO14523 706 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 GRM6O15303 877 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 MED7O43513 233 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 DNAJB1P25685 340 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 ANXA13P27216 316 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 ERVFC1P60507 584 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 FMO1Q01740 532 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 GPM6BQ13491 265 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 STILQ15468 1287 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 MAPRE1Q15691 268 aaKnown RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 ASTE1Q2TB18 679 aaPredicted RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 MDH1BQ5I0G3 518 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 PPP1R26Q5T8A7 1209 aaPredicted RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 CLSTN3Q9BQT9 956 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 NHEJ1Q9H9Q4 299 aaPredicted RBP13.31□□□□□ -0.28
PDPN-210ENST00000513143 RXFP1Q9HBX9 757 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 TLR9Q9NR96 1032 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDPN-210ENST00000513143 FAM49BQ9NUQ9 324 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 FNIP2Q9P278 1114 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDPN-210ENST00000513143 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
PDPN-210ENST00000513143 ATG2AQ2TAZ0 1938 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 FSCN2O14926 492 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 CXCL14O95715 111 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 MMEP08473 750 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
PDPN-210ENST00000513143 CREMQ03060 361 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 SMARCB1Q12824 385 aa13.3□□□□□ -0.28
PDPN-210ENST00000513143 GPR17Q13304 367 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms