RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	KIN	O60870	393 aa	Known RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM163B	P0C2L3	166 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZSCAN22	P10073	491 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TDGF1	P13385	188 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CFAP221	Q4G0U5	840 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	INTS6L	Q5JSJ4	861 aa	Known RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SCARA3	Q6AZY7	606 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM171B	Q6P995	826 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RALGPS2	Q86X27	583 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CMTM8	Q8IZV2	173 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CELF5	Q8N6W0	485 aa	Known RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GLIS3	Q8NEA6	775 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM200A	Q8TCP9	573 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CSGALNACT1	Q8TDX6	532 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ATRIP	Q8WXE1	791 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RUBCN	Q92622	972 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CEP295NL	Q96MC4	621 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LMAN1L	Q9HAT1	526 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ABI2	Q9NYB9	513 aa	Predicted RBP	13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HSPBP1	Q9NZL4	362 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TICRR	Q7Z2Z1	1910 aa		13.49	□□□□□ -0.25
UBE2D3-231	ENST00000513098	UBE4B	O95155	1302 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PVALEF	A0A1B0GWK0	134 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DPYSL4	O14531	572 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TGFB1I1	O43294	461 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PAPSS2	O95340	614 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CSH1	P0DML2	217 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CSH2	P0DML3	217 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CCNE1	P24864	410 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PCSK1	P29120	753 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NRL	P54845	237 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NLRP12	P59046	1061 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RPL10A	P62906	217 aa	Known RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MYL7	Q01449	175 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MYO1E	Q12965	1108 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TAF12	Q16514	161 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SOWAHA	Q2M3V2	549 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	UNC13D	Q70J99	1090 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CBWD2	Q8IUF1	395 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	WDR49	Q8IV35	697 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	BPIFB1	Q8TDL5	484 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TMEM174	Q8WUU8	243 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HPS3	Q969F9	1004 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TRMT2B	Q96GJ1	504 aa	Known RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ANKRD36BP1	Q96IX9	119 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GCNA	Q96QF7	691 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM83C	Q9BQN1	747 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MTMR12	Q9C0I1	747 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	EPC1	Q9H2F5	836 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DDX43	Q9NXZ2	648 aa	Known RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CGN	Q9P2M7	1197 aa	Known RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NDRG2	Q9UN36	371 aa	Known RBP	13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SNX9	Q9Y5X1	595 aa		13.48	□□□□□ -0.25
UBE2D3-231	ENST00000513098	POLR2D	O15514	142 aa	Known RBP	13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PRPF40A	O75400	957 aa	Known RBP	13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	NOL4	O94818	638 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PRAMEF12	O95522	483 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TMEM191B	P0C7N4	346 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MAGEA11	P43364	429 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ASIC1	P78348	528 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ZNF268	Q14587	947 aa	Predicted RBP	13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PPP2R5D	Q14738	602 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	BMT2	Q1RMZ1	405 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DGKK	Q5KSL6	1271 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	FAM26F	Q5R3K3	315 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RESP18	Q5W5W9	173 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	MON1A	Q86VX9	555 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	C12orf56	Q8IXR9	622 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SYNPO	Q8N3V7	929 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SPEM1	Q8N4L4	309 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	OR5B17	Q8NGF7	314 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GIPC2	Q8TF65	315 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SCFD1	Q8WVM8	642 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	DHX58	Q96C10	678 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HPDL	Q96IR7	371 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PI4K2A	Q9BTU6	479 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	AGPAT3	Q9NRZ7	376 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	THG1L	Q9NWX6	298 aa	Known RBP	13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	UXT	Q9UBK9	157 aa	Predicted RBP	13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	RCOR1	Q9UKL0	485 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GTF3C4	Q9UKN8	822 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CFAP45	Q9UL16	551 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PCDHA7	Q9UN72	937 aa		13.47	□□□□□ -0.25
UBE2D3-231	ENST00000513098	PTPRJ	Q12913	1337 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SPECC1L-ADORA2A	F8WAN1	911 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	F13A1	P00488	732 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TNNC2	P02585	160 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KRT19	P08727	400 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CYP2F1	P24903	491 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	HOXA6	P31267	233 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CTH	P32929	405 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CCR3	P51677	355 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KPNA1	P52294	538 aa	Predicted RBP	13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CYP4F8	P98187	520 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	BFSP1	Q12934	665 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	LRRC32	Q14392	662 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GAS6	Q14393	721 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	SNRNP35	Q16560	246 aa	Known RBP	13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ERMP1	Q7Z2K6	904 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms