RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 LRCH1Q9Y2L9 728 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 MAST1Q9Y2H9 1570 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 CEP170BQ9Y4F5 1589 aaPredicted RBP5.06□□□□□ -1.6
HTT-210ENST00000512909 ERVK-7P63135 1459 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 SHANK2Q9UPX8 1470 aa5.06□□□□□ -1.6
HTT-210ENST00000512909 ROCK1Q13464 1354 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 CFAP65Q6ZU64 1925 aaKnown RBP5.05□□□□□ -1.6
HTT-210ENST00000512909 TMEM2Q9UHN6 1383 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 DNMT1P26358 1616 aaKnown RBP5.05□□□□□ -1.6
HTT-210ENST00000512909 USP19O94966 1318 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 CCDC195A0A1B0GUA6 201 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 POM121BA6NF01 834 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 THAP12O43422 761 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 INMTO95050 263 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 KIF20AO95235 890 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 CYP2C9P11712 490 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 IDEP14735 1019 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 GCSHP23434 173 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 ACRV1P26436 265 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 SCNN1GP51170 649 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 FMO1Q01740 532 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 NOMO2Q5JPE7 1267 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TAPT1Q6NXT6 567 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 CLNKQ7Z7G1 428 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 MORC1Q86VD1 984 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 YAF2Q8IY57 180 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 COLGALT2Q8IYK4 626 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TTC9BQ8N6N2 239 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TMIEQ8NEW7 156 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 ANKS1AQ92625 1134 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TRIM63Q969Q1 353 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 IQCDQ96DY2 449 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 MRGPRX1Q96LB2 322 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 C8orf49Q96NF6 230 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TRIM54Q9BYV2 358 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 TTYH3Q9C0H2 523 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
HTT-210ENST00000512909 KLC2Q9H0B6 622 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 CERS4Q9HA82 394 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 GPR35Q9HC97 309 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 A1CFQ9NQ94 594 aaKnown RBP5.05□□□□□ -1.6
HTT-210ENST00000512909 KLHL11Q9NVR0 708 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 STK26Q9P289 416 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 SHOC2Q9UQ13 582 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 DMTF1Q9Y222 760 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 MED16Q9Y2X0 877 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 RAD54BQ9Y620 910 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 FPGT-TNNI3KV9GXZ4 949 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 MROH2AA6NES4 1674 aa5.05□□□□□ -1.6
HTT-210ENST00000512909 XDHP47989 1333 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 A0A0G2JLL6 359 aaPredicted RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 A0A1B0GTW7 788 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 LEFTY2O00292 366 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 TBX3O15119 743 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 FAM20BO75063 409 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 ATXN1LP0C7T5 689 aaKnown RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 FGFR4P22455 802 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 RABGGTBP53611 331 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 MAPK10P53779 464 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 HSD11B2P80365 405 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 DAG1Q14118 895 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 GALEQ14376 348 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 IQCB1Q15051 598 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 LONRF3Q496Y0 759 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 RABL3Q5HYI8 236 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 CRB2Q5IJ48 1285 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 NAIF1Q69YI7 327 aaPredicted RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 SWSAP1Q6NVH7 229 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 ARMC6Q6NXE6 501 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 TTLL10Q6ZVT0 673 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 RNF44Q7L0R7 432 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 BEND5Q7L4P6 421 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 C1orf210Q8IVY1 113 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 MAPKAPK5Q8IW41 473 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 CFAP52Q8N1V2 620 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 TXLNBQ8N3L3 684 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 DVL3Q92997 716 aaPredicted RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 GJA10Q969M2 543 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 LTV1Q96GA3 475 aaPredicted RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 KLHL32Q96NJ5 620 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 PPP1R9BQ96SB3 815 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 TESQ9UGI8 421 aaKnown RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 RAPGEFL1Q9UHV5 662 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 PADI4Q9UM07 663 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 MAGED2Q9UNF1 606 aaPredicted RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 REXO2Q9Y3B8 237 aaKnown RBP5.04□□□□□ -1.6
HTT-210ENST00000512909 DAAM1Q9Y4D1 1078 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 PLA2R1Q13018 1463 aa5.04□□□□□ -1.6
HTT-210ENST00000512909 ARHGAP31Q2M1Z3 1444 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms