RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 FAM9CQ8IZT9 166 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CNTROBQ8N137 903 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 NUP93Q8N1F7 819 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 LRRC47Q8N1G4 583 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 CSGALNACT2Q8N6G5 542 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 GRPEL2Q8TAA5 225 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TEX47Q8TBZ9 253 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SLC22A8Q8TCC7 542 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 PLEKHO2Q8TD55 490 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 COG1Q8WTW3 980 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CLIP3Q96DZ5 547 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZNF274Q96GC6 653 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 REXO5Q96IC2 774 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZC3H10Q96K80 434 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 TSNARE1Q96NA8 513 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 XPO6Q96QU8 1125 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 DNAJC7Q99615 494 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CIB1Q99828 191 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ALG1Q9BT22 464 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TUBB6Q9BUF5 446 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 OR51B5Q9H339 312 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CCDC86Q9H6F5 360 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 AZI2Q9H6S1 392 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SH2D4AQ9H788 454 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 CNOT10Q9H9A5 744 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZC4H2Q9NQZ6 224 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SDHAF3Q9NRP4 125 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 SYBUQ9NX95 663 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ZNF624Q9P2J8 865 aaPredicted RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 TBC1D14Q9P2M4 693 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 UVRAGQ9P2Y5 699 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 ASIC3Q9UHC3 531 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 AGO2Q9UKV8 859 aaKnown RBP4.28□□□□□ -1.72
GYPA-208ENST00000512064 SNX7Q9UNH6 387 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 TIMM22Q9Y584 194 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 FMN1Q68DA7 1419 aa4.28□□□□□ -1.72
GYPA-208ENST00000512064 POLR3AO14802 1390 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 KIAA0232Q92628 1395 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 PRDM15P57071 1507 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 TCOF1Q13428 1488 aaKnown RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 LOC100289279A0A1B0GTE1 492 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 CTAGE9A4FU28 777 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 DPPA5A6NC42 116 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 SLC22A31A6NKX4 558 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 TRPC5OSA6NMA1 111 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 UPK3BL1B0FP48 263 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 UPK3BL2E5RIL1 263 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 E9PBE3 544 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 LINC01387J3KSC0 135 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 FANCGO15287 622 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 KCNQ3O43525 872 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 GRIN3BO60391 1043 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 DEAF1O75398 565 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 KLHL2O95198 593 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 RASGRP1O95267 797 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 GJB6O95452 261 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 NPPAP01160 153 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 OPN1MWP04001 364 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 IFNA16P05015 189 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 FYNP06241 537 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 ITGA2BP08514 1039 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 GSTT2P0CG29 244 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 GSTT2BP0CG30 244 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 OPN1MW2P0DN77 364 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 OPN1MW3P0DN78 364 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 ZSCAN22P10073 491 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 KRT3P12035 628 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 HCLS1P14317 486 aaPredicted RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 CSF2RAP15509 400 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 NME1P15531 152 aaKnown RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 PDGFRAP16234 1089 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 ITGAXP20702 1163 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 PDCP20941 246 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 AXLP30530 894 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 PKLRP30613 574 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 HNF1BP35680 557 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 STAT1P42224 750 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 POLD2P49005 469 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 NR2C2P49116 596 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 VPS41P49754 854 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 HNRNPFP52597 415 aaKnown RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 ADKP55263 362 aaKnown RBP4.27□□□□□ -1.73
GYPA-208ENST00000512064 NUP107P57740 925 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 PPP2R2AP63151 447 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 HPCAP84074 193 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 TFAP4Q01664 338 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 ROR1Q01973 937 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 CHRNEQ04844 493 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 SPAG1Q07617 926 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 LGALS3BPQ08380 585 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 KLHL30Q0D2K2 578 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 PRKG2Q13237 762 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 TRPC3Q13507 836 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 GIT2Q14161 759 aa4.27□□□□□ -1.73
GYPA-208ENST00000512064 NFE2Q16621 373 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms