RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TPCN2Q8NHX9 752 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 FAM118BQ9BPY3 351 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 RUBCNLQ9H714 662 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PIK3R2O00459 728 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ASNA1O43681 348 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 MYBL1P10243 752 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 IL10P22301 178 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 NPTX2P47972 431 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 NPY5RQ15761 445 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 FGD2Q7Z6J4 655 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 KCTD17Q8N5Z5 321 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 MTBPQ96DY7 904 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ASPSCR1Q9BZE9 553 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 GINM1Q9NU53 330 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 DNAAF3Q8N9W5 541 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 EME1Q96AY2 570 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 ANKZF1Q9H8Y5 726 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM8AQ9HCN3 771 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 BCL9LQ86UU0 1499 aa11.32□□□□□ -0.6
CPNE4-209ENST00000512055 M0QYV0 167 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 CALB1P05937 261 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ANXA13P27216 316 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 KCNJ1P48048 391 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ACAD11Q709F0 780 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 MMGT1Q8N4V1 131 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 FANCEQ9HB96 536 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 OATP04181 439 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 FGFR4P22455 802 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 PDZD4Q76G19 769 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ZNF483Q8TF39 744 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 MID2Q9UJV3 735 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 BLOC1S6Q9UL45 172 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 IGSF9BQ9UPX0 1349 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 RASA4BC9J798 803 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 RASA4O43374 803 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 SGPL1O95470 568 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 NUP62P37198 522 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 EFNA5P52803 228 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 HIC1Q14526 733 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 TRIP10Q15642 601 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ABHD8Q96I13 439 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 PYGMP11217 842 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 EFTUD2Q15029 972 aaKnown RBP eCLIP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 GATAD2AQ86YP4 633 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 IRF2BP1Q8IU81 584 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 SRRM1Q8IYB3 904 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
CPNE4-209ENST00000512055 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 HEY1Q9Y5J3 304 aa11.31□□□□□ -0.6
CPNE4-209ENST00000512055 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ZNF839A8K0R7 811 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 COPEO14579 308 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 TNFRSF21O75509 655 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ZSCAN20P17040 1043 aaPredicted RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 NMD3Q96D46 503 aaKnown RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 FAM187AA6NFU0 413 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 TISP43B9A030 160 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 WDR59Q6PJI9 974 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 PYROXD1Q8WU10 500 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
CPNE4-209ENST00000512055 SLC35C1Q96A29 364 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 CAAP1Q9H8G2 361 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 PDP2Q9P2J9 529 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 SIK3Q9Y2K2 1263 aa11.3□□□□□ -0.6
CPNE4-209ENST00000512055 MYL3P08590 195 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms