RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 ANO9A1A5B4 782 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 RCCD1A6NED2 376 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 TK2O00142 265 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PER2O15055 1255 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 CYP26A1O43174 497 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 HRO43593 1189 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 LRRN2O75325 713 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 TACC1O75410 805 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 GLP2RO95838 553 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 NFICP08651 508 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 H2AFZP0C0S5 128 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 CYP11B1P15538 503 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PDE6CP51160 858 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 MYL6P60660 151 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 CDR2Q01850 454 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PAK2Q13177 524 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 TCEAL1Q15170 157 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ZNF667Q5HYK9 610 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 H2AFVQ71UI9 128 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 MRPL10Q7Z7H8 261 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 CMTR2Q8IYT2 770 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 LRRC52Q8N7C0 313 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 UBR7Q8N806 425 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 KAT5Q92993 513 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 MSLNLQ96KJ4 702 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 LACRTQ9GZZ8 138 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 KCNH6Q9H252 994 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ERVK-5Q9HDB9 667 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 DPP3Q9NY33 737 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 DNAI1Q9UI46 699 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 SIX4Q9UIU6 781 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 LRFN2Q9ULH4 789 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 PADI3Q9ULW8 664 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 UBQLN1Q9UMX0 589 aaKnown RBP11.11□□□□□ -0.63
HOXA4-203ENST00000511914 GUCA1BQ9UMX6 200 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 ST3GAL5Q9UNP4 418 aa11.11□□□□□ -0.63
HOXA4-203ENST00000511914 CTAGE9A4FU28 777 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 TMEM221A6NGB7 291 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 M0R296 226 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 RTN2O75298 545 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 RECQL4O94761 1208 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 KRT5P13647 590 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 PAX3P23760 479 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 USP8P40818 1118 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 PNPLA4P41247 253 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 ZNF132P52740 706 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 MYO1EQ12965 1108 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 TWF2Q6IBS0 349 aaKnown RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 EFHBQ8N7U6 833 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 SMRP1Q8NCR6 262 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 OLIG1Q8TAK6 271 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 DDX1Q92499 740 aaKnown RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 RPGRIP1Q96KN7 1286 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 NOX5Q96PH1 765 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 ALS2CR12Q96Q35 445 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 WDR24Q96S15 920 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 UBN1Q9NPG3 1134 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 SLC38A7Q9NVC3 462 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 SNTG2Q9NY99 539 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 KIAA1257Q9ULG3 409 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 GIT1Q9Y2X7 761 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
HOXA4-203ENST00000511914 IPPQ9Y573 584 aa11.1□□□□□ -0.63
HOXA4-203ENST00000511914 ITGB3P05106 788 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 PAEPP09466 180 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 CHRNB2P17787 502 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 HADHBP55084 474 aaKnown RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 DSC3Q14574 896 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 SPOPLQ6IQ16 392 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 NOP9Q86U38 636 aaKnown RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 SLC47A2Q86VL8 602 aa11.09□□□□□ -0.63
HOXA4-203ENST00000511914 SUGP1Q8IWZ8 645 aaKnown RBP11.09□□□□□ -0.63
HOXA4-203ENST00000511914 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms