RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 GIPC1O14908 333 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 SERPING1P05155 500 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 HDCP19113 662 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 GCLMP48507 274 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 FXR1P51114 621 aaKnown RBP eCLIP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 ERVK-21P61565 698 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 TIGD7Q6NT04 549 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 RSPO2Q6UXX9 243 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 RRAGAQ7L523 313 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 CCDC89Q8N998 374 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 ATXN2LQ8WWM7 1075 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 RSAD2Q8WXG1 361 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 KRT35Q92764 455 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 EPSTI1Q96J88 318 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC32A1Q9H598 525 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 DEC1Q9P2X7 70 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 SYCE3A1L190 88 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 MBLAC1A4D2B0 266 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 OR1D2P34982 312 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 C21orf59P57076 290 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 PNOCQ13519 176 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 NFIL3Q16649 462 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 TJAP1Q5JTD0 557 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 ARMC6Q6NXE6 501 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 ZNF384Q8TF68 577 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 IGSF21Q96ID5 467 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 TAB2Q9NYJ8 693 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 DNAJC12Q9UKB3 198 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
POLR2J3-215ENST00000511313 MEI4A8MW99 385 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 INPPL1O15357 1258 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC1A1P43005 524 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 NRIP1P48552 1158 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 POLR2FP61218 127 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 PSMC1P62191 440 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 GRB10Q13322 594 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ITGB3BPQ13352 177 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 LRRC26Q2I0M4 334 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 MPPE1Q53F39 396 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 PALB2Q86YC2 1186 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 IL31RAQ8NI17 732 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 DDX1Q92499 740 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 N4BP2L2Q92802 583 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ZNF653Q96CK0 615 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ZNF668Q96K58 619 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 FZD8Q9H461 694 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 LRRC72A6NJI9 287 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 PRR5-ARHGAP8B1AHC4 643 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 MCF2LO15068 1137 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ACTN4O43707 911 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 TSPAN1O60635 241 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 HSF2BPO75031 334 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 KCNE1P15382 129 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 GJC1P36383 396 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 NDUFA8P51970 172 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 TMED2Q15363 201 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 USP39Q53GS9 565 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 CCDC170Q8IYT3 715 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 TOP1MTQ969P6 601 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 SUSD3Q96L08 255 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 MAPK8IP1Q9UQF2 711 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 HBS1LQ9Y450 684 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 MIF4GDA9UHW6 222 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 KLHL41O60662 606 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 CYP2A6P11509 494 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 SLC12A2P55011 1212 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 ZBED6P86452 979 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 IRAK1BP1Q5VVH5 260 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 RNF214Q8ND24 703 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 VN1R2Q8NFZ6 395 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 TRAPPC12Q8WVT3 735 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 MUC3BQ9H195 1237 aa10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.17□□□□□ -0.78
POLR2J3-215ENST00000511313 PIGRP01833 764 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 PSMA2P25787 234 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 AIF1P55008 147 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 DEUP1Q05D60 604 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 CUL2Q13617 745 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 GSE1Q14687 1217 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 GPR158Q5T848 1215 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 IL31Q6EBC2 164 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 ZNF852Q6ZMS4 543 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 CDKL3Q8IVW4 592 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 DDI1Q8WTU0 396 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 IFT43Q96FT9 208 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 KLHL5Q96PQ7 755 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 C2orf49Q9BVC5 232 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TBC1D13Q9NVG8 400 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 VPS9D1Q9Y2B5 631 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 TBC1D3BA6NDS4 549 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 ARIH2O95376 493 aa10.16□□□□□ -0.78
POLR2J3-215ENST00000511313 ARF4P18085 180 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms