RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CST5P28325 142 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 EPHB4P54760 987 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLURP1P55000 103 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 NSUN2Q08J23 767 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 DDX10Q13206 875 aaKnown RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 PLA1AQ53H76 456 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TMTC4Q5T4D3 741 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 CRTC1Q6UUV9 634 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 NBPF11Q86T75 865 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 MOGAT3Q86VF5 341 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 CCDC28AQ8IWP9 274 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 CFAP52Q8N1V2 620 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 PCDHAC1Q9H158 963 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 EPC1Q9H2F5 836 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TP63Q9H3D4 680 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZSCAN32Q9NX65 697 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 MAP3K20Q9NYL2 800 aaKnown RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 DNMT3BQ9UBC3 853 aaKnown RBP6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 HDAC5Q9UQL6 1122 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 TMEM98Q9Y2Y6 226 aa6.37□□□□□ -1.39
HMGB1P47-201ENST00000511281 J3KRW8 73 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 EYA2O00167 538 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 RAB27BO00194 218 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ASNA1O43681 348 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 RRP9O43818 475 aaKnown RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 IPO13O94829 963 aaKnown RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 NTSR2O95665 410 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 FCER1AP12319 257 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 TAL1P17542 331 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 TPH1P17752 444 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 GNAT2P19087 354 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 MST1P26927 711 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 LRPAP1P30533 357 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 CASP2P42575 452 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 LINC00310P59036 64 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 IQCB1Q15051 598 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SURF1Q15526 300 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZNF750Q32MQ0 723 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ARHGAP15Q53QZ3 475 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 METRNLQ641Q3 311 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 NAIF1Q69YI7 327 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 USP49Q70CQ1 688 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 HTR3DQ70Z44 454 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 TMPRSS9Q7Z410 1059 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 NME8Q8N427 588 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SIMC1Q8NDZ2 872 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC30A5Q8TAD4 765 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 POC1BQ8TC44 478 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SMCR8Q8TEV9 937 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 RAPGEF4Q8WZA2 1011 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SKA1Q96BD8 255 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SDCCAG3Q96C92 435 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAM227BQ96M60 508 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 MEGF9Q9H1U4 602 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 UNC45AQ9H3U1 944 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SAYSD1Q9NPB0 183 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 MRPS18AQ9NVS2 196 aaKnown RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 FBXO9Q9UK97 447 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZMYND8Q9ULU4 1186 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SCAF8Q9UPN6 1271 aaKnown RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 SHOC2Q9UQ13 582 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 ATP11BQ9Y2G3 1177 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 MTO1Q9Y2Z2 717 aaKnown RBP6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 CDY1Q9Y6F8 540 aa6.36□□□□□ -1.39
HMGB1P47-201ENST00000511281 A0A0B4J269 797 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 RRN3P2A6NIE6 340 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 E7ENX8 843 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 CDC14BO60729 498 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 SOAT2O75908 522 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PRSS23O95084 383 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 ITGB1P05556 798 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PTDSS1P48651 473 aaKnown RBP6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PNLIPRP1P54315 467 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 LOXL3P58215 753 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PPP2CBP62714 309 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PPP2CAP67775 309 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 TAP2Q03519 686 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 LMOD3Q0VAK6 560 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 BOP1Q14137 746 aaKnown RBP6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 TAF5Q15542 800 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 MGAT5BQ3V5L5 792 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 NOMO2Q5JPE7 1267 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 HYIQ5T013 277 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 FAXCQ5TGI0 409 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 RAP1GAP2Q684P5 730 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 LRRTM4Q86VH4 590 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 HERC6Q8IVU3 1022 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 LGI4Q8N135 537 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 THAP4Q8WY91 577 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 HERVK_113Q902F9 699 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 ZDHHC12Q96GR4 267 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 SLC46A1Q96NT5 459 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 LMF1Q96S06 567 aa6.35□□□□□ -1.39
HMGB1P47-201ENST00000511281 PRPF18Q99633 342 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms