RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SF3A1Q15459 793 aaKnown RBP24.62■■□□□ 1.53
SMAD5-207ENST00000511116 LARP1BQ659C4 914 aaKnown RBP24.62■■□□□ 1.53
SMAD5-207ENST00000511116 SFR1Q86XK3 245 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 KRI1Q8N9T8 703 aaKnown RBP24.62■■□□□ 1.53
SMAD5-207ENST00000511116 CXorf38Q8TB03 319 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 ZNF560Q96MR9 790 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 PKMYT1Q99640 499 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 SEL1LQ9UBV2 794 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 SMC3Q9UQE7 1217 aa24.62■■□□□ 1.53
SMAD5-207ENST00000511116 ZNF638Q14966 1978 aaKnown RBP24.62■■□□□ 1.53
SMAD5-207ENST00000511116 GDF9O60383 454 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 AVPR1AP37288 418 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 RAP1GAPP47736 663 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 CDR1P51861 262 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 LIMK1P53667 647 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 TAF12Q16514 161 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 NFE2Q16621 373 aaPredicted RBP24.61■■□□□ 1.53
SMAD5-207ENST00000511116 MON1AQ86VX9 555 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 MAB21L3Q8N8X9 362 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 RASSF8Q8NHQ8 419 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 GAB3Q8WWW8 586 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 POMGNT1Q8WZA1 660 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 ABCB6Q9NP58 842 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 TDP1Q9NUW8 608 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 STK17AQ9UEE5 414 aa24.61■■□□□ 1.53
SMAD5-207ENST00000511116 TADA3O75528 432 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 CSH1P0DML2 217 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 CSH2P0DML3 217 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 PPM1JQ5JR12 505 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 USP49Q70CQ1 688 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 CEP68Q76N32 757 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 BRSK2Q8IWQ3 736 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 PDCL2Q8N4E4 241 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 SPATA18Q8TC71 538 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 DNAJC19Q96DA6 116 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 TRMT2BQ96GJ1 504 aaKnown RBP24.6■■□□□ 1.53
SMAD5-207ENST00000511116 EPSTI1Q96J88 318 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 MYRFLQ96LU7 910 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 ACBD6Q9BR61 282 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 L1RE1Q9UN81 338 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 USP24Q9UPU5 2620 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 EML5Q05BV3 1969 aa24.6■■□□□ 1.53
SMAD5-207ENST00000511116 AKAP3O75969 853 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 NOL4O94818 638 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 TSPY1Q01534 308 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 KCNA1Q09470 495 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 GRSF1Q12849 480 aaKnown RBP eCLIP24.59■■□□□ 1.53
SMAD5-207ENST00000511116 TXNDC8Q6A555 127 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 TRIM68Q6AZZ1 485 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 LRRC52Q8N7C0 313 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 C1orf127Q8N9H9 656 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 EBF3Q9H4W6 596 aa24.59■■□□□ 1.53
SMAD5-207ENST00000511116 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.59■■□□□ 1.53
SMAD5-207ENST00000511116 ATG13O75143 517 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 EPN2O95208 641 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 GPR15P49685 360 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 BFSP1Q12934 665 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 L1TD1Q5T7N2 865 aaKnown RBP24.58■■□□□ 1.53
SMAD5-207ENST00000511116 DYMQ7RTS9 669 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 MRPS31Q92665 395 aaKnown RBP24.58■■□□□ 1.53
SMAD5-207ENST00000511116 PI4K2AQ9BTU6 479 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 OLFML3Q9NRN5 406 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 GDAP2Q9NXN4 497 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 ATG2BQ96BY7 2078 aa24.58■■□□□ 1.53
SMAD5-207ENST00000511116 TM4SF5O14894 197 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 PRPF40AO75400 957 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 ZNF806P0C7X5 589 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 ARSAP15289 507 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 GAP43P17677 238 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 POLR2BP30876 1174 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 PDGFRLQ15198 375 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 INTS6LQ5JSJ4 861 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 CACNA2D4Q7Z3S7 1137 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 TMEM86AQ8N2M4 240 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 CAMKK1Q8N5S9 505 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 ZSWIM2Q8NEG5 633 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 DDX1Q92499 740 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 ZC3H10Q96K80 434 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 FBRSL1Q9HCM7 1045 aaKnown RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 UXTQ9UBK9 157 aaPredicted RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 FBXO2Q9UK22 296 aaPredicted RBP24.57■■□□□ 1.52
SMAD5-207ENST00000511116 EXOC7Q9UPT5 735 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 LAMA1P25391 3075 aa24.57■■□□□ 1.52
SMAD5-207ENST00000511116 FRMD3A2A2Y4 597 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 MYMKA6NI61 221 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 RPP40O75818 363 aaKnown RBP24.56■■□□□ 1.52
SMAD5-207ENST00000511116 EGFP01133 1207 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 ITGB3P05106 788 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 DRD1P21728 446 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 GARTP22102 1010 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 RPL10AP62906 217 aaKnown RBP24.56■■□□□ 1.52
SMAD5-207ENST00000511116 AMPD2Q01433 879 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 CFAP221Q4G0U5 840 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 PLA2G2CQ5R387 149 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 SCARA3Q6AZY7 606 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 STKLD1Q8NE28 680 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 ACCSQ96QU6 501 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 FAM213AQ9BRX8 229 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 TMEM206Q9H813 350 aa24.56■■□□□ 1.52
SMAD5-207ENST00000511116 MRPL44Q9H9J2 332 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms