RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 FAM46DQ8NEK8 389 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 PCDH12Q9NPG4 1184 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 PNPOQ9NVS9 261 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 SH2B3Q9UQQ2 575 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 ZNF804BA4D1E1 1349 aa6.5□□□□□ -1.37
NUP54-209ENST00000510569 DCLK1O15075 740 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 SLC16A3O15427 465 aaKnown RBP6.49□□□□□ -1.37
NUP54-209ENST00000510569 TLR5O60602 858 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 DNAJB5O75953 348 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 JTBO76095 146 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 PDHA1P08559 390 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 NDUFB7P17568 137 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 PPIFP30405 207 aaKnown RBP6.49□□□□□ -1.37
NUP54-209ENST00000510569 LOXL3P58215 753 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 NKX6-1P78426 367 aaPredicted RBP6.49□□□□□ -1.37
NUP54-209ENST00000510569 GRM1Q13255 1194 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 PROSER3Q2NL68 480 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 PGS1Q32NB8 556 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 ICE2Q659A1 982 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 MAVSQ7Z434 540 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 ZNF804AQ7Z570 1209 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 SLC46A1Q96NT5 459 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 CACNA1IQ9P0X4 2223 aa6.49□□□□□ -1.37
NUP54-209ENST00000510569 H0YIZ8 118 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 ATXN1LP0C7T5 689 aaKnown RBP6.48□□□□□ -1.37
NUP54-209ENST00000510569 EXOSC9Q06265 439 aaKnown RBP6.48□□□□□ -1.37
NUP54-209ENST00000510569 PLS1Q14651 629 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 SLC44A4Q53GD3 710 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 SLC29A4Q7RTT9 530 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 WDR53Q7Z5U6 358 aaPredicted RBP6.48□□□□□ -1.37
NUP54-209ENST00000510569 CATIPQ7Z7H3 387 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 BRIX1Q8TDN6 353 aaKnown RBP6.48□□□□□ -1.37
NUP54-209ENST00000510569 GTPBP4Q9BZE4 634 aaKnown RBP6.48□□□□□ -1.37
NUP54-209ENST00000510569 TCF7L1Q9HCS4 588 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 PCDHA1Q9Y5I3 950 aa6.48□□□□□ -1.37
NUP54-209ENST00000510569 ONECUT2O95948 504 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 IL6RP08887 468 aaPredicted RBP6.47□□□□□ -1.37
NUP54-209ENST00000510569 FAM163BP0C2L3 166 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 AKAP5P24588 427 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 ALDH9A1P49189 494 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 LONRF3Q496Y0 759 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 TMEM119Q4V9L6 283 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 Q8N9P0 234 aaPredicted RBP6.47□□□□□ -1.37
NUP54-209ENST00000510569 CHMP4CQ96CF2 233 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 HSPBAP1Q96EW2 488 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 MVB12AQ96EY5 273 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 NUP88Q99567 741 aaPredicted RBP6.47□□□□□ -1.37
NUP54-209ENST00000510569 DLL3Q9NYJ7 618 aa6.47□□□□□ -1.37
NUP54-209ENST00000510569 LUC7L2Q9Y383 392 aaKnown RBP6.47□□□□□ -1.37
NUP54-209ENST00000510569 IL33O95760 270 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 PRR35P0CG20 571 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 ITGB6P18564 788 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 LIPAP38571 399 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 MTX3Q5HYI7 312 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 NEK8Q86SG6 692 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.46□□□□□ -1.38
NUP54-209ENST00000510569 SLC35A4Q96G79 324 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 SH3BP4Q9P0V3 963 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 SSX2IPQ9Y2D8 614 aa6.46□□□□□ -1.38
NUP54-209ENST00000510569 TISP43B9A030 160 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 MYO1FO00160 1098 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 CERS1P27544 350 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 CLCN2P51788 898 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 SOX8P57073 446 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 BRDTQ58F21 947 aaPredicted RBP6.45□□□□□ -1.38
NUP54-209ENST00000510569 ZNF626Q68DY1 528 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 TTYH3Q9C0H2 523 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 HOMER2Q9NSB8 354 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 SERTAD3Q9UJW9 196 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 PLEKHM1Q9Y4G2 1056 aa6.45□□□□□ -1.38
NUP54-209ENST00000510569 UNC5CO95185 931 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 NHLRC4P0CG21 123 aaPredicted RBP6.44□□□□□ -1.38
NUP54-209ENST00000510569 HDCP19113 662 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 VCAM1P19320 739 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 EPHB2P29323 1055 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 CYP2C18P33260 490 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 VIPR2P41587 438 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 PXNP49023 591 aaPredicted RBP6.44□□□□□ -1.38
NUP54-209ENST00000510569 EEFSECP57772 596 aaKnown RBP6.44□□□□□ -1.38
NUP54-209ENST00000510569 IQCB1Q15051 598 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 TREML2Q5T2D2 321 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 LAYNQ6UX15 382 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 ZBTB46Q86UZ6 589 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 FANCBQ8NB91 859 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 ATG4AQ8WYN0 398 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 FSD1LQ9BXM9 530 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 DUSP22Q9NRW4 184 aa6.44□□□□□ -1.38
NUP54-209ENST00000510569 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
NUP54-209ENST00000510569 H3BUI4 141 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 ERC2O15083 957 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 TP73O15350 636 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 KELP23276 732 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 LILRA4P59901 499 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 TUBA4AP68366 448 aa6.43□□□□□ -1.38
NUP54-209ENST00000510569 SP2Q02086 613 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms