RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 NXPE3Q969Y0 559 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 FUBP3Q96I24 572 aaKnown RBP eCLIP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 SYT15Q9BQS2 421 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 APOBEC3GQ9HC16 384 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 GDE1Q9NZC3 331 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 IGSF9Q9P2J2 1179 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 NXF1Q9UBU9 619 aaKnown RBP12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 COQ4Q9Y3A0 265 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 PCDHB5Q9Y5E4 795 aa12.57□□□□□ -0.4
HMGXB3-203ENST00000510472 ZNF197O14709 1029 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 PMM2O15305 246 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 CYP2F1P24903 491 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 MAGEA11P43364 429 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 ASPAP45381 313 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 TNNC1P63316 161 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 HTR4Q13639 388 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 KRT39Q6A163 491 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 SPOPLQ6IQ16 392 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 GAREM2Q75VX8 874 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 GPT2Q8TD30 523 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 RSAD2Q8WXG1 361 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 SLC35C1Q96A29 364 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 FAXDC2Q96IV6 333 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 BCO2Q9BYV7 579 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 MRPS23Q9Y3D9 190 aaKnown RBP12.56□□□□□ -0.4
HMGXB3-203ENST00000510472 DOCK6Q96HP0 2047 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 NOTCH4Q99466 2003 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 STX10O60499 249 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 CEBPBP17676 345 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PTPN1P18031 435 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 GPR15P49685 360 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PSMC1P62191 440 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PAK1Q13153 545 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 TDGQ13569 410 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 CBWD6Q4V339 395 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 CBWD3Q5JTY5 395 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 CBWD5Q5RIA9 395 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PARM1Q6UWI2 310 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 UBALD2Q8IYN6 164 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 ELMOD1Q8N336 334 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 MLKLQ8NB16 471 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 FGF14Q92915 247 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PCED1BQ96HM7 432 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 SEPT5Q99719 369 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 LPIN3Q9BQK8 851 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 SMOC2Q9H3U7 446 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 DPEP3Q9H4B8 488 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 C2orf16Q68DN1 1984 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 DENND4AQ7Z401 1863 aa12.55□□□□□ -0.4
HMGXB3-203ENST00000510472 TRIOO75962 3097 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 TSC2P49815 1807 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 PIK3CAP42336 1068 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 RAP1GAPP47736 663 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 MXI1P50539 228 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 STX17P56962 302 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 SIGLEC14Q08ET2 396 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 MTMR3Q13615 1198 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 DDR2Q16832 855 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 TMEM31Q5JXX7 168 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 VSTM1Q6UX27 236 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 TMEM150AQ86TG1 271 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 FBXL13Q8NEE6 735 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
HMGXB3-203ENST00000510472 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms