RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 CRYBG2Q8N1P7 616 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 RNF10Q8N5U6 811 aaKnown RBP10.84□□□□□ -0.67
NEK1-205ENST00000510108 APPL2Q8NEU8 664 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 NT5C1AQ9BXI3 368 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ZNF518BQ9C0D4 1074 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 LHX5Q9H2C1 402 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 LRFN2Q9ULH4 789 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 INPP5FQ9Y2H2 1132 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 NME7Q9Y5B8 376 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ARHGEF37A1IGU5 675 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 THAP12O43422 761 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 MED7O43513 233 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 HUS1O60921 280 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 DDHD2O94830 711 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 CFHP08603 1231 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 CSF2RAP15509 400 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 SYN1P17600 705 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 TYMPP19971 482 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ETF1P62495 437 aaKnown RBP10.84□□□□□ -0.67
NEK1-205ENST00000510108 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ARHGAP17Q68EM7 881 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 DCLRE1AQ6PJP8 1040 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 LRRC43Q8N309 656 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 TFAP2BQ92481 460 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 CALR3Q96L12 384 aaKnown RBP10.84□□□□□ -0.67
NEK1-205ENST00000510108 SENP8Q96LD8 212 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 C16orf45Q96MC5 204 aaPredicted RBP10.84□□□□□ -0.67
NEK1-205ENST00000510108 PAAF1Q9BRP4 392 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 IL23AQ9NPF7 189 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 LZTFL1Q9NQ48 299 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 TAS2R14Q9NYV8 317 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.84□□□□□ -0.67
NEK1-205ENST00000510108 STXBP5LQ9Y2K9 1186 aa10.84□□□□□ -0.67
NEK1-205ENST00000510108 O00370 1275 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 CYB561D2O14569 222 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 DGKIO75912 1065 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 KIF4AO95239 1232 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 ABL1P00519 1130 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 CALCAP01258 141 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 ODC1P11926 461 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 CD46P15529 392 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 IGFBP6P24592 240 aaPredicted RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 LHX1P48742 406 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 GALCP54803 685 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 HADHBP55084 474 aaKnown RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 GSCP56915 257 aaPredicted RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 CNGA2Q16280 664 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 TIGD5Q53EQ6 642 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 ZNF394Q53GI3 561 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 SGO2Q562F6 1265 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 LCLAT1Q6UWP7 414 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
NEK1-205ENST00000510108 MON1BQ7L1V2 547 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 OSTM1Q86WC4 334 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 ZNF280BQ86YH2 543 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 TOP1MTQ969P6 601 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 ZNF689Q96CS4 500 aaPredicted RBP10.83□□□□□ -0.68
NEK1-205ENST00000510108 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 VCPIP1Q96JH7 1222 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 DSEQ9UL01 958 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 TFR2Q9UP52 801 aa10.83□□□□□ -0.68
NEK1-205ENST00000510108 MKI67P46013 3256 aaKnown RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 ZBBXA8MT70 800 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 KIF5CO60282 957 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 B3GAT3O94766 335 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 MTA2O94776 668 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 FTLP02792 175 aaPredicted RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 AMHP03971 560 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 MYBL1P10243 752 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 TNNT1P13805 278 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 GNL1P36915 607 aaPredicted RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 WDR5P61964 334 aaKnown RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 PTP4A2Q12974 167 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 WSCD1Q658N2 575 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 TMEM35BQ8NCS4 154 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 OR6B3Q8NGW1 331 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 CTNNBL1Q8WYA6 563 aaPredicted RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 RFFLQ8WZ73 363 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 BADQ92934 168 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 SECISBP2LQ93073 1101 aaKnown RBP10.82□□□□□ -0.68
NEK1-205ENST00000510108 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 TNIP3Q96KP6 325 aa10.82□□□□□ -0.68
NEK1-205ENST00000510108 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms