RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 CCNE1P24864 410 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 TNFSF9P41273 254 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 FKBP3Q00688 224 aaKnown RBP11.09□□□□□ -0.63
PTPN20-222ENST00000509774 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
PTPN20-222ENST00000509774 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 ZCWPW2Q504Y3 356 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 CCDC183Q5T5S1 534 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
PTPN20-222ENST00000509774 VPS52Q8N1B4 723 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 ST13P5Q8NFI4 369 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-222ENST00000509774 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 SHDQ96IW2 340 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 MKNK1Q9BUB5 465 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 PCIF1Q9H4Z3 704 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 RBAKQ9NYW8 714 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-222ENST00000509774 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 WASF3Q9UPY6 502 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
PTPN20-222ENST00000509774 F5P12259 2224 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 FAM170BA6NMN3 283 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 CETN3O15182 167 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 CLIC2O15247 247 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 FGFR1OPO95684 399 aaKnown RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 NR3C1P04150 777 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 TDGF1P13385 188 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 BMP6P22004 513 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 LRPAP1P30533 357 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 LIMK1P53667 647 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 AP3M2P53677 418 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 ADAM9Q13443 819 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 HTR4Q13639 388 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 UBXN2BQ14CS0 331 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 UPP1Q16831 310 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 SEZ6Q53EL9 994 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 RNF19BQ6ZMZ0 732 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 ERCC4Q92889 916 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 GATA6Q92908 595 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 ZMAT2Q96NC0 199 aaKnown RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 IKZF4Q9H2S9 585 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
PTPN20-222ENST00000509774 DNAJB4Q9UDY4 337 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 SSX2IPQ9Y2D8 614 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 LAMA1P25391 3075 aa11.08□□□□□ -0.64
PTPN20-222ENST00000509774 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 IKBKBO14920 756 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 MEFVO15553 781 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 KCNK5O95279 499 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 SPINK2P20155 84 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 NR2F2P24468 414 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 PSMC2P35998 433 aaKnown RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 MAGEA9P43362 315 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 OR1G1P47890 313 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 SLC11A1P49279 550 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CYP2J2P51589 502 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 NLRP12P59046 1061 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 GPC5P78333 572 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CLDN10P78369 228 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 PSMD6Q15008 389 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 DUOXA2Q1HG44 320 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 ZBTB41Q5SVQ8 909 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 INTS8Q75QN2 995 aaKnown RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 FILIP1Q7Z7B0 1213 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CYP4X1Q8N118 509 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CEP63Q96MT8 703 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
PTPN20-222ENST00000509774 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 ADAM28Q9UKQ2 775 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 CLUHO75153 1309 aa11.07□□□□□ -0.64
PTPN20-222ENST00000509774 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 GOLGA8IPA6NC78 632 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 BIN1O00499 593 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 ZBTB24O43167 697 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-222ENST00000509774 TADA2AO75478 443 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 GNA14O95837 355 aa11.06□□□□□ -0.64
PTPN20-222ENST00000509774 EFEMP2O95967 443 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms