RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 YIPF1Q9Y548 306 aa7.76□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF233A6NK53 670 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 GABRDO14764 452 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 KIAA0391O15091 583 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CCL16O15467 120 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 KINO60870 393 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 TADA3O75528 432 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 LDHAP00338 332 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 C8AP07357 584 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ASPAP45381 313 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CACNA2D1P54289 1103 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 STX17P56962 302 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 SNRPFP62306 86 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ELAVL2Q12926 359 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 SOWAHAQ2M3V2 549 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ZACNQ401N2 412 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CTXN3Q4LDR2 81 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CBWD6Q4V339 395 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CBWD3Q5JTY5 395 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CBWD5Q5RIA9 395 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CEP135Q66GS9 1140 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF280DQ6N043 979 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 SCARA5Q6ZMJ2 495 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ANKS3Q6ZW76 656 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 STXBP4Q6ZWJ1 553 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 NT5DC4Q86YG4 428 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 TMC8Q8IU68 726 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ADHFE1Q8IWW8 467 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 LRRC52Q8N7C0 313 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 SNIP1Q8TAD8 396 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 TAS1R2Q8TE23 839 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF592Q92610 1267 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 SMARCE1Q969G3 411 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 TWNKQ96RR1 684 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 MYADMQ96S97 322 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 PI4K2AQ9BTU6 479 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 LRRC3Q9BY71 257 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ZCWPW1Q9H0M4 648 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ADAM7Q9H2U9 754 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF334Q9HCZ1 680 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CRTAC1Q9NQ79 661 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 GDAP2Q9NXN4 497 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CEP72Q9P209 647 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 NUB1Q9Y5A7 615 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 CLUHO75153 1309 aa7.75□□□□□ -1.17
TOPBP1-207ENST00000509162 DMDP11532 3685 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ARHGEF37A1IGU5 675 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 KPNA7A9QM74 516 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 CYB561D2O14569 222 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 NCK2O43639 380 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ATP2C2O75185 946 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 STAU1O95793 577 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 POU2F2P09086 479 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 TMEM191BP0C7N4 346 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ODC1P11926 461 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 CEBPBP17676 345 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 CCNE1P24864 410 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 LMO2P25791 158 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 SMCPP49901 116 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ARPP19P56211 112 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 PSMC1P62191 440 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 YWHAHQ04917 246 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ORC1Q13415 861 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 MYBPC2Q14324 1141 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 EDRF1Q3B7T1 1238 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 PRSS36Q5K4E3 855 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 DSTYKQ6XUX3 929 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 SV2AQ7L0J3 742 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 IRF2BP1Q8IU81 584 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 FAM186BQ8IYM0 893 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 UBR7Q8N806 425 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ATAD1Q8NBU5 361 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ITFG1Q8TB96 612 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 PPP2R3CQ969Q6 453 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 TCEAL4Q96EI5 215 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 ZNF560Q96MR9 790 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 TSPAN18Q96SJ8 248 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 MKNK1Q9BUB5 465 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 TMEM63CQ9P1W3 806 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 CGNQ9P2M7 1197 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 DNMT3BQ9UBC3 853 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 INSL5Q9Y5Q6 135 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 SNX9Q9Y5X1 595 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 GREB1Q4ZG55 1949 aa7.74□□□□□ -1.17
TOPBP1-207ENST00000509162 KMT2EQ8IZD2 1858 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 CCDC195A0A1B0GUA6 201 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 TTC24A2A3L6 582 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MYBPHLA2RUH7 354 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 GOLGA6L4A6NEF3 574 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 MAPK13O15264 365 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 XPOTO43592 962 aaKnown RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 DKK1O94907 266 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 HLA-DRAP01903 254 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 ASGR2P07307 311 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 KRT19P08727 400 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 CCNYL3P0C7X3 344 aa7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 HOXB8P17481 243 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-207ENST00000509162 WARSP23381 471 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms