RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RSPRY1Q96DX4 576 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 SHDQ96IW2 340 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 ACBD6Q9BR61 282 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 TRMT61BQ9BVS5 477 aaKnown RBP15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 GDAP2Q9NXN4 497 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 HSFX1Q9UBD0 423 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 MTF2Q9Y483 593 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 PATJQ8NI35 1801 aa15.89■□□□□ 0.13
UBE2D3-228ENST00000508974 USP34Q70CQ2 3546 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 HEPACAM2A8MVW5 462 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 ATP2C2O75185 946 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 CST3P01034 146 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 CYP2F1P24903 491 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 STARD6P59095 220 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 ANGPT1Q15389 498 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 DDR2Q16832 855 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 ARHGAP15Q53QZ3 475 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 ZNF516Q92618 1163 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 GZF1Q9H116 711 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
UBE2D3-228ENST00000508974 KANSL1LA0AUZ9 987 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 MYBPHLA2RUH7 354 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PHACTR2O75167 634 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PDGFRBP09619 1106 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 GLULP15104 373 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PSMC3P17980 439 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 LMO2P25791 158 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 LHX1P48742 406 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SNRPFP62306 86 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PRKCQQ04759 706 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SMARCB1Q12824 385 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PSMD2Q13200 908 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 NFE2Q16621 373 aaPredicted RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 KRBA2Q6ZNG9 492 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SPATA2LQ8IUW3 424 aaPredicted RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 ARID3BQ8IVW6 561 aaPredicted RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SCN4BQ8IWT1 228 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 C12orf56Q8IXR9 622 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 YAF2Q8IY57 180 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PLEKHO2Q8TD55 490 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 KBTBD7Q8WVZ9 684 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SYT15Q9BQS2 421 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 MKNK1Q9BUB5 465 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 GPR88Q9GZN0 384 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 SMG9Q9H0W8 520 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 IRF2BPLQ9H1B7 796 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 CGNQ9P2M7 1197 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 PTPRDP23468 1912 aa15.87■□□□□ 0.13
UBE2D3-228ENST00000508974 DMDP11532 3685 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 FAM170BA6NMN3 283 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 DPYSL4O14531 572 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 GABRDO14764 452 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 ZNF263O14978 683 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 PRAMEF12O95522 483 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 FGF19O95750 216 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 PCSK1P29120 753 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 MYL6P60660 151 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 TNNC1P63316 161 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 BIRC3Q13489 604 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 TRPC3Q13507 836 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 TTC8Q8TAM2 541 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 GOLGA5Q8TBA6 731 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 MYLPFQ96A32 169 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 PKMYT1Q99640 499 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 KCTD10Q9H3F6 313 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 IL21Q9HBE4 155 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 LTB4R2Q9NPC1 389 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 DLGAP2Q9P1A6 1054 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 NXF1Q9UBU9 619 aaKnown RBP15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 NDRG2Q9UN36 371 aaKnown RBP15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 CACNA1HO95180 2353 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 GREB1Q4ZG55 1949 aa15.86■□□□□ 0.13
UBE2D3-228ENST00000508974 VPS13AQ96RL7 3174 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 LRRIQ3A6PVS8 624 aaPredicted RBP15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 ZNF202O95125 648 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 NR3C1P04150 777 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 TARSP26639 723 aaKnown RBP15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 CDC25CP30307 473 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 DLG4P78352 724 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 DPYDQ12882 1025 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 WDR72Q3MJ13 1102 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 SCARA5Q6ZMJ2 495 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 MFSD6LQ8IWD5 586 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 TTC16Q8NEE8 873 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 OR6B3Q8NGW1 331 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 DEPDC1BQ8WUY9 529 aa15.85■□□□□ 0.13
UBE2D3-228ENST00000508974 DNASE1L2Q92874 299 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms