RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 CRIPAKQ8N1N5 446 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 RSPH1Q8WYR4 309 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 VWCEQ96DN2 955 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
NFKB1-207ENST00000508584 GTF3C4Q9UKN8 822 aa17.03■□□□□ 0.32
NFKB1-207ENST00000508584 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
NFKB1-207ENST00000508584 TRIP11Q15643 1979 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 B4GALT3O60512 393 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 MICAL2O94851 1124 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 PDGFRBP09619 1106 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 ODC1P11926 461 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 CSF2RAP15509 400 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 DNAJB2P25686 324 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 GATMP50440 423 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 MON1BQ7L1V2 547 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 CRYBG2Q8N1P7 616 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 C1orf131Q8NDD1 294 aaKnown RBP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 VCPIP1Q96JH7 1222 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 CALR3Q96L12 384 aaKnown RBP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 MRPL9Q9BYD2 267 aaKnown RBP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 DPEP3Q9H4B8 488 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 ADAM22Q9P0K1 906 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 CNOT8Q9UFF9 292 aaKnown RBP17.02■□□□□ 0.32
NFKB1-207ENST00000508584 PCDHGC5Q9Y5F6 944 aa17.02■□□□□ 0.32
NFKB1-207ENST00000508584 ABHD14A-ACY1A0A1B0GW23 586 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 ARHGEF37A1IGU5 675 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 GRID2IPA4D2P6 1211 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 TMEM189-UBE2V1I3L0A0 370 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 M0QYV0 167 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 GABRDO14764 452 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 HCRTO43612 131 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 PALMO75781 387 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 KIF4AO95239 1232 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 LMO2P25791 158 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 BRCC3P46736 316 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 OR1G1P47890 313 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 LHX1P48742 406 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 GOLGA7BQ2TAP0 167 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 PAN2Q504Q3 1202 aaKnown RBP17.01■□□□□ 0.31
NFKB1-207ENST00000508584 TMEM240Q5SV17 173 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 ARHGAP17Q68EM7 881 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 PSRC1Q6PGN9 363 aaPredicted RBP17.01■□□□□ 0.31
NFKB1-207ENST00000508584 MMS22LQ6ZRQ5 1243 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 WDTC1Q8N5D0 677 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 C11orf70Q9BRQ4 267 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 AVENQ9NQS1 362 aaPredicted RBP17.01■□□□□ 0.31
NFKB1-207ENST00000508584 SCN1AP35498 2009 aa17.01■□□□□ 0.31
NFKB1-207ENST00000508584 TBKBP1A7MCY6 615 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 I3L4J1 428 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 M0QZQ0 153 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 ATMINO43313 823 aaPredicted RBP17■□□□□ 0.31
NFKB1-207ENST00000508584 MTA2O94776 668 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 CALB1P05937 261 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 PFKMP08237 780 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 MMP8P22894 467 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 HADHBP55084 474 aaKnown RBP17■□□□□ 0.31
NFKB1-207ENST00000508584 PTP4A2Q12974 167 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 C16orf59Q7L2K0 433 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 METTL23Q86XA0 190 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 C12orf29Q8N999 325 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 HASPINQ8TF76 798 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 TIFAQ96CG3 184 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 SUSD3Q96L08 255 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
NFKB1-207ENST00000508584 MTIF3Q9H2K0 278 aaKnown RBP17■□□□□ 0.31
NFKB1-207ENST00000508584 OSGEPQ9NPF4 335 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 FAM49BQ9NUQ9 324 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 UVRAGQ9P2Y5 699 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 TSPAN16Q9UKR8 245 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 DSEQ9UL01 958 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 COG5Q9UP83 839 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 JRKLQ9Y4A0 524 aa17■□□□□ 0.31
NFKB1-207ENST00000508584 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
NFKB1-207ENST00000508584 EFCAB14O75071 495 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 URI1O94763 535 aaPredicted RBP16.99■□□□□ 0.31
NFKB1-207ENST00000508584 AMHP03971 560 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 CYP11A1P05108 521 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 ITGB1P05556 798 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 ACRP10323 421 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 RRM1P23921 792 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 PPP1R26Q5T8A7 1209 aaPredicted RBP16.99■□□□□ 0.31
NFKB1-207ENST00000508584 ZNF365Q70YC5 407 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 ERICH1Q86X53 443 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 B3GALNT2Q8NCR0 500 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 MSANTD4Q8NCY6 345 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 UBA3Q8TBC4 463 aa16.99■□□□□ 0.31
NFKB1-207ENST00000508584 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms