RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 HCRTO43612 131 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 LILRB5O75023 590 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 KRT19P08727 400 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 TMEM191BP0C7N4 346 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 CHRNB1P11230 501 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 ACAT1P24752 427 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 CCNE1P24864 410 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 GPR15P49685 360 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 ASIC1P78348 528 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 EHHADHQ08426 723 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 GAS6Q14393 721 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 NFE2Q16621 373 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 TOP6BLQ8N6T0 577 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 OR5B17Q8NGF7 314 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 SPATA18Q8TC71 538 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 MSANTD3Q96H12 275 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 IER2Q9BTL4 223 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 LRRC27Q9C0I9 530 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 ZSCAN32Q9NX65 697 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 SNX9Q9Y5X1 595 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 GREB1Q4ZG55 1949 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 ANAPC1Q9H1A4 1944 aa13.98□□□□□ -0.17
HMGCS1-205ENST00000508319 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 DPYSL4O14531 572 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 GABRDO14764 452 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 HUS1O60921 280 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 TADA3O75528 432 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 F13A1P00488 732 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 F11P03951 625 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 ZSCAN22P10073 491 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 CTHP32929 405 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 NLRP12P59046 1061 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 RBP5P82980 135 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 MYL7Q01449 175 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 SOWAHAQ2M3V2 549 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 ARHGAP29Q52LW3 1261 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 SDHAF4Q5VUM1 108 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 TXNDC11Q6PKC3 985 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 LIMS2Q7Z4I7 341 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 ADGRF2Q8IZF7 708 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 IQUBQ8NA54 791 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 BPIFB1Q8TDL5 484 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 RUBCNQ92622 972 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 ANKRD36BP1Q96IX9 119 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 SMG9Q9H0W8 520 aaKnown RBP13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 EPC1Q9H2F5 836 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 C8orf33Q9H7E9 229 aaPredicted RBP13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 LMAN1LQ9HAT1 526 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 MAGEF1Q9HAY2 307 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 GTSE1Q9NYZ3 720 aa13.97□□□□□ -0.17
HMGCS1-205ENST00000508319 UBE4BO95155 1302 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 MYBPHLA2RUH7 354 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 ZNF233A6NK53 670 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 TGFB1I1O43294 461 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 PRPF40AO75400 957 aaKnown RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 CYP2F1P24903 491 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 CASP1P29466 404 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 AMPD3Q01432 767 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 TNK2Q07912 1038 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 PKP1Q13835 747 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 TAF12Q16514 161 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 CFAP221Q4G0U5 840 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 WDR49Q8IV35 697 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 CMTM8Q8IZV2 173 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 TTC8Q8TAM2 541 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 SCFD1Q8WVM8 642 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 KBTBD7Q8WVZ9 684 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 FAM126AQ9BYI3 521 aaPredicted RBP13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 ZMYM5Q9UJ78 669 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 CCL26Q9Y258 94 aa13.96□□□□□ -0.17
HMGCS1-205ENST00000508319 POLR2DO15514 142 aaKnown RBP13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 NOL4O94818 638 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 TNNC2P02585 160 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 CSH1P0DML2 217 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 CSH2P0DML3 217 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 PCSK1P29120 753 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 AVPR1AP37288 418 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 ID4P47928 161 aa13.95□□□□□ -0.18
HMGCS1-205ENST00000508319 LHX1P48742 406 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms