RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 COX11Q9Y6N1 276 aa6.34□□□□□ -1.39
DHFR-204ENST00000508282 C1QL1O75973 258 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 PDHA1P08559 390 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 U2AF1L5P0DN76 240 aaPredicted RBP6.33□□□□□ -1.4
DHFR-204ENST00000508282 ARFIP2P53365 341 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 U2AF1Q01081 240 aaKnown RBP eCLIP6.33□□□□□ -1.4
DHFR-204ENST00000508282 ANO6Q4KMQ2 910 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.33□□□□□ -1.4
DHFR-204ENST00000508282 MAGEB6Q8N7X4 407 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 RFKQ969G6 155 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 FKBP10Q96AY3 582 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 ATP6V0A4Q9HBG4 840 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 SERHLQ9NQF3 203 aa6.33□□□□□ -1.4
DHFR-204ENST00000508282 PIH1D1Q9NWS0 290 aaKnown RBP6.33□□□□□ -1.4
DHFR-204ENST00000508282 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 LINC00473A8K010 186 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 PPM1DO15297 605 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 TSPAN6O43657 245 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 IGLV2-14P01704 120 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 GPSM2P81274 684 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 IQCB1Q15051 598 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 MINDY4Q4G0A6 757 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 AMOTQ4VCS5 1084 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 ARHGEF25Q86VW2 580 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
DHFR-204ENST00000508282 PBKQ96KB5 322 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.32□□□□□ -1.4
DHFR-204ENST00000508282 XPR1Q9UBH6 696 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 DKK3Q9UBP4 350 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 ENTPD2Q9Y5L3 495 aa6.32□□□□□ -1.4
DHFR-204ENST00000508282 A0A1W2PPL8 197 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ORC4O43929 436 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
DHFR-204ENST00000508282 KITP10721 976 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 VIPR2P41587 438 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 SLC11A2P49281 568 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ELLP55199 621 aaPredicted RBP6.31□□□□□ -1.4
DHFR-204ENST00000508282 UCP3P55916 312 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 LOXL3P58215 753 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 LILRA4P59901 499 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 MLC1Q15049 377 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 TBCCQ15814 346 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 DPY19L2P1Q6NXN4 242 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 GRASPQ7Z6J2 395 aaPredicted RBP6.31□□□□□ -1.4
DHFR-204ENST00000508282 KIAA0319LQ8IZA0 1049 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 KBTBD7Q8WVZ9 684 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 UROC1Q96N76 676 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 NELL2Q99435 816 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 TIMP4Q99727 224 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 TRIM54Q9BYV2 358 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 TMEM60Q9H2L4 133 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ASB6Q9NWX5 421 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 ST3GAL5Q9UNP4 418 aa6.31□□□□□ -1.4
DHFR-204ENST00000508282 LRRC3CA6NJW4 275 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 A6NNZ2 444 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 THP07101 528 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 ITPKBP27987 946 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 PCSK6P29122 969 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
DHFR-204ENST00000508282 EIF2B5Q13144 721 aaKnown RBP6.3□□□□□ -1.4
DHFR-204ENST00000508282 SFRP4Q6FHJ7 346 aaPredicted RBP6.3□□□□□ -1.4
DHFR-204ENST00000508282 LAYNQ6UX15 382 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 MAEAQ7L5Y9 396 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 PTDSS2Q9BVG9 487 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 EHD3Q9NZN3 535 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 TCEAL9Q9UHQ7 104 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 SERTAD3Q9UJW9 196 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 TMX2Q9Y320 296 aa6.3□□□□□ -1.4
DHFR-204ENST00000508282 FAM227AF5H4B4 570 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 ERC2O15083 957 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 PHGDHO43175 533 aaKnown RBP6.29□□□□□ -1.4
DHFR-204ENST00000508282 URI1O94763 535 aaPredicted RBP6.29□□□□□ -1.4
DHFR-204ENST00000508282 NR2F6P10588 404 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 SP2Q02086 613 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 AKNAD1Q5T1N1 836 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 TSTD2Q5T7W7 516 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 ICE2Q659A1 982 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 DNAJC5GQ8N7S2 189 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 IL31RAQ8NI17 732 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 TSR2Q969E8 191 aaKnown RBP6.29□□□□□ -1.4
DHFR-204ENST00000508282 MOGAT1Q96PD6 335 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 DPH1Q9BZG8 443 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 C1orf112Q9NSG2 853 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 ARPP21Q9UBL0 812 aaPredicted RBP6.29□□□□□ -1.4
DHFR-204ENST00000508282 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
DHFR-204ENST00000508282 L1RE1Q9UN81 338 aa6.29□□□□□ -1.4
DHFR-204ENST00000508282 A0A087WWL8 130 aa6.28□□□□□ -1.4
DHFR-204ENST00000508282 CAPN8A6NHC0 703 aa6.28□□□□□ -1.4
DHFR-204ENST00000508282 BTN3A1O00481 513 aa6.28□□□□□ -1.4
DHFR-204ENST00000508282 ZFXP17010 805 aaPredicted RBP6.28□□□□□ -1.4
DHFR-204ENST00000508282 WT1P19544 449 aaPredicted RBP6.28□□□□□ -1.4
DHFR-204ENST00000508282 FBLP22087 321 aaKnown RBP6.28□□□□□ -1.4
DHFR-204ENST00000508282 PPIFP30405 207 aaKnown RBP6.28□□□□□ -1.4
DHFR-204ENST00000508282 CTBP1Q13363 440 aa6.28□□□□□ -1.4
DHFR-204ENST00000508282 LLGL1Q15334 1064 aa6.28□□□□□ -1.4
DHFR-204ENST00000508282 ARHGAP29Q52LW3 1261 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms