RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 WDR4P57081 412 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 LACTBP83111 547 aaPredicted RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 GRM1Q13255 1194 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 MTM1Q13496 603 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 MXD4Q14582 209 aaPredicted RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 COPS5Q92905 334 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 INO80BQ9C086 356 aaPredicted RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PAPPA2Q9BXP8 1791 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 SOCS7O14512 581 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 CD48P09326 243 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 CXCL8P10145 99 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 KRT3P12035 628 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PSMA2P25787 234 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 GDF10P55107 478 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PKN2Q16513 984 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
LIN54-207ENST00000508171 ANKMY2Q8IV38 441 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 MAF1Q9H063 256 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 VPS37BQ9H9H4 285 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 PTPRHQ9HD43 1115 aa11.51□□□□□ -0.57
LIN54-207ENST00000508171 IGKV6-21A0A0C4DH24 114 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 NOP56O00567 594 aaKnown RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 IRF6O14896 467 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 LRCH4O75427 683 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 PROZP22891 400 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CLCN3P51790 818 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 COPS2P61201 443 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ELF3P78545 371 aaPredicted RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 SLC25A11Q02978 314 aaKnown RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 TAF5Q15542 800 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CCDC142Q17RM4 750 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 MPZL3Q6UWV2 235 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ARHGEF18Q6ZSZ5 1173 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TSHZ1Q6ZSZ6 1077 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 SPATA21Q7Z572 469 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TBC1D1Q86TI0 1168 aaPredicted RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 TRABD2AQ86V40 505 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 NIPA2Q8N8Q9 360 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 FGD4Q96M96 766 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CPXM1Q96SM3 734 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 NKIRAS1Q9NYS0 192 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CST8O60676 142 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 SUN1O94901 812 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ITGAVP06756 1048 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 ABHD2P08910 425 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TAC1P20366 129 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 PDIA2Q13087 525 aaKnown RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 MORF4L2Q15014 288 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 Q3C1V9 767 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 FAM47EQ6ZV65 393 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 SLC35B2Q8TB61 432 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TCP11Q8WWU5 503 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 NKD2Q969F2 451 aaPredicted RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
LIN54-207ENST00000508171 RMDN2Q96LZ7 410 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 MAGEB18Q96M61 343 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TWNKQ96RR1 684 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 PPP1R16BQ96T49 567 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 TXNRD2Q9NNW7 524 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 PCSK1NQ9UHG2 260 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 SIX4Q9UIU6 781 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 PNMA3Q9UL41 463 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 CEP83Q9Y592 693 aa11.5□□□□□ -0.57
LIN54-207ENST00000508171 A0A1W2PPM1 405 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 FAM47DPA6NHR8 397 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 SIGLEC16A6NMB1 481 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ACKR2O00590 384 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 ALOX15BO15296 676 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 MGRN1O60291 552 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 TNNC2P02585 160 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 RAD23BP54727 409 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 NRLP54845 237 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 PSMC1P62191 440 aaKnown RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 TAP1Q03518 808 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 MGAT5Q09328 741 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 SNCBQ16143 134 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 CELF3Q5SZQ8 465 aaKnown RBP11.49□□□□□ -0.57
LIN54-207ENST00000508171 ANKRD22Q5VYY1 191 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 EFCAB12Q6NXP0 572 aa11.49□□□□□ -0.57
LIN54-207ENST00000508171 C4orf33Q8N1A6 199 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms