RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RABGGTBP53611 331 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 STILQ15468 1287 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 C10orf76Q5T2E6 689 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 PPP1R26Q5T8A7 1209 aaPredicted RBP18.54■□□□□ 0.56
RNF4-209ENST00000507784 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 ACAD10Q6JQN1 1059 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
RNF4-209ENST00000507784 TAS1R1Q7RTX1 841 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 SLC39A11Q8N1S5 342 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 B3GALNT2Q8NCR0 500 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 OLIG1Q8TAK6 271 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 UBA3Q8TBC4 463 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 CPA5Q8WXQ8 436 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 B3GALT6Q96L58 329 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 HESX1Q9UBX0 185 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 PCDHGC3Q9UN70 934 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 TFR2Q9UP52 801 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 VWA8A3KMH1 1905 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 USP27XA6NNY8 438 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 O00370 1275 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 CYP1A1P04798 512 aaPredicted RBP18.53■□□□□ 0.56
RNF4-209ENST00000507784 H2AFZP0C0S5 128 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 FGFR3P22607 806 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 VAV2P52735 878 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 TSPY1Q01534 308 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 CTXN3Q4LDR2 81 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 VARS2Q5ST30 1063 aaKnown RBP18.53■□□□□ 0.56
RNF4-209ENST00000507784 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 KIAA0319Q5VV43 1072 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 H2AFVQ71UI9 128 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 TXLNBQ8N3L3 684 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 TMEM35BQ8NCS4 154 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 RTP3Q9BQQ7 232 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 ACBD6Q9BR61 282 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 TSPAN16Q9UKR8 245 aa18.53■□□□□ 0.56
RNF4-209ENST00000507784 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.53■□□□□ 0.56
RNF4-209ENST00000507784 MYH10P35580 1976 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 A0A0U1RQJ8 604 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 MYBPHLA2RUH7 354 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 GRXCR1A8MXD5 290 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 ESPNB1AK53 854 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 H7C4K7 107 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 FTLP02792 175 aaPredicted RBP18.52■□□□□ 0.56
RNF4-209ENST00000507784 GZMAP12544 262 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 NSFP46459 744 aaKnown RBP18.52■□□□□ 0.56
RNF4-209ENST00000507784 USP41Q3LFD5 358 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 INTS6LQ5JSJ4 861 aaKnown RBP18.52■□□□□ 0.56
RNF4-209ENST00000507784 ARHGAP17Q68EM7 881 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 KIAA1841Q6NSI8 718 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 LCLAT1Q6UWP7 414 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 REXO1L1PQ8IX06 675 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 SLC2A14Q8TDB8 520 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 ATRIPQ8WXE1 791 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 PPP1R13BQ96KQ4 1090 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 TMEM209Q96SK2 561 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 TTPALQ9BTX7 342 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 PACSIN1Q9BY11 444 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 LZTFL1Q9NQ48 299 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 CRTAC1Q9NQ79 661 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 GTF3C4Q9UKN8 822 aa18.52■□□□□ 0.56
RNF4-209ENST00000507784 LCHNA4D1U4 455 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 H0YGN5 161 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 OAZ2O95190 189 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 UNGP13051 313 aaPredicted RBP18.51■□□□□ 0.55
RNF4-209ENST00000507784 ABCB4P21439 1286 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 PPM1AP35813 382 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 GALCP54803 685 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 ARPP19P56211 112 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 NOMO3P69849 1222 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 KRT17Q04695 432 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 KIF5AQ12840 1032 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 CCDC142Q17RM4 750 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 ARHGAP29Q52LW3 1261 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 ZNF280DQ6N043 979 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 DCP1BQ8IZD4 617 aaKnown RBP18.51■□□□□ 0.55
RNF4-209ENST00000507784 C1orf131Q8NDD1 294 aaKnown RBP18.51■□□□□ 0.55
RNF4-209ENST00000507784 OR10T2Q8NGX3 314 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 RIN2Q8WYP3 895 aaPredicted RBP18.51■□□□□ 0.55
RNF4-209ENST00000507784 B3GNT5Q9BYG0 378 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 LHX5Q9H2C1 402 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 NENFQ9UMX5 172 aa18.51■□□□□ 0.55
RNF4-209ENST00000507784 RCCD1A6NED2 376 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 CLDN5O00501 218 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 C2CD2LO14523 706 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
RNF4-209ENST00000507784 OR4Q2P0C623 313 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 PPP1R2P3Q6NXS1 205 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 PRSS55Q6UWB4 352 aaPredicted RBP18.5■□□□□ 0.55
RNF4-209ENST00000507784 ANKS3Q6ZW76 656 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 ERICH1Q86X53 443 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 WDTC1Q8N5D0 677 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 MYCBPAPQ8TBZ2 947 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 SP7Q8TDD2 431 aaPredicted RBP18.5■□□□□ 0.55
RNF4-209ENST00000507784 SECISBP2LQ93073 1101 aaKnown RBP18.5■□□□□ 0.55
RNF4-209ENST00000507784 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 HNRNPABQ99729 332 aaKnown RBP18.5■□□□□ 0.55
RNF4-209ENST00000507784 HERC2P3Q9BVR0 1158 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 VN1R3Q9BXE9 311 aa18.5■□□□□ 0.55
RNF4-209ENST00000507784 ZNF518BQ9C0D4 1074 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms