RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 TDGF1P13385 188 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 CTHP32929 405 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 HOXD13P35453 343 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 CXCL12P48061 93 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 NLRP12P59046 1061 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 TNK2Q07912 1038 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 DDR2Q16832 855 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 WDR44Q5JSH3 913 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
SSBP2-207ENST00000507472 C1orf228Q6PIY5 440 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 STXBP4Q6ZWJ1 553 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 RALGPS2Q86X27 583 aaPredicted RBP17.04■□□□□ 0.32
SSBP2-207ENST00000507472 CMTM8Q8IZV2 173 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 CELF5Q8N6W0 485 aaKnown RBP17.04■□□□□ 0.32
SSBP2-207ENST00000507472 MAB21L3Q8N8X9 362 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 STKLD1Q8NE28 680 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 DHX58Q96C10 678 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 ZNF396Q96N95 335 aaPredicted RBP17.04■□□□□ 0.32
SSBP2-207ENST00000507472 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 EPC1Q9H2F5 836 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 GTF3C4Q9UKN8 822 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 TSC2P49815 1807 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 PATJQ8NI35 1801 aa17.04■□□□□ 0.32
SSBP2-207ENST00000507472 ZNF233A6NK53 670 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 CYP2F1P24903 491 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 CCR3P51677 355 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 NRLP54845 237 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 PLCB2Q00722 1185 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 SOWAHAQ2M3V2 549 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 INTS6LQ5JSJ4 861 aaKnown RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 SHC4Q6S5L8 630 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 ERMP1Q7Z2K6 904 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 OSTM1Q86WC4 334 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 OR5B17Q8NGF7 314 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 PKMYT1Q99640 499 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 CUEDC2Q9H467 287 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 THG1LQ9NWX6 298 aaKnown RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 NCDNQ9UBB6 729 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 MAGED2Q9UNF1 606 aaPredicted RBP17.03■□□□□ 0.32
SSBP2-207ENST00000507472 COL4A2P08572 1712 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 SPTBN2O15020 2390 aa17.03■□□□□ 0.32
SSBP2-207ENST00000507472 PTPRJQ12913 1337 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 GABRDO14764 452 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 HCRTO43612 131 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 CUTAO60888 179 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 CSH1P0DML2 217 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 CSH2P0DML3 217 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 AVPR1AP37288 418 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 LHX1P48742 406 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 AMPD3Q01432 767 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 MYL7Q01449 175 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 SATB1Q01826 763 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 LRRC32Q14392 662 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 CCDC142Q17RM4 750 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 ADGRF2Q8IZF7 708 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 SPEM1Q8N4L4 309 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 TOP6BLQ8N6T0 577 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 IQUBQ8NA54 791 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 ZNF507Q8TCN5 953 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
SSBP2-207ENST00000507472 ANKRD36BP1Q96IX9 119 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 ABCB6Q9NP58 842 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 ZMYM5Q9UJ78 669 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 SMG5Q9UPR3 1016 aaKnown RBP17.02■□□□□ 0.32
SSBP2-207ENST00000507472 CCL26Q9Y258 94 aa17.02■□□□□ 0.32
SSBP2-207ENST00000507472 TCHHQ07283 1943 aa17.02■□□□□ 0.31
SSBP2-207ENST00000507472 NCOR2Q9Y618 2525 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 YEATS4O95619 227 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 ASIC1P78348 528 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 MYO1EQ12965 1108 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 PON2Q15165 354 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 SURF1Q15526 300 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 ITPRIPL2Q3MIP1 535 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 DGKKQ5KSL6 1271 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 CNNM4Q6P4Q7 775 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 Q6ZS52 159 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 MON1AQ86VX9 555 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms