RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 STKLD1Q8NE28 680 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 VN1R2Q8NFZ6 395 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 TAF4BQ92750 862 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 MRPL38Q96DV4 380 aaKnown RBP9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 TRIM5Q9C035 493 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 CRISPLD1Q9H336 500 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 TLE6Q9H808 572 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 CRTAC1Q9NQ79 661 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 MTRRQ9UBK8 725 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 PCDHB4Q9Y5E5 795 aa9.43□□□□□ -0.9
SCAMP1-202ENST00000506858 WDR27A2RRH5 827 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 TACC1O75410 805 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 SEC24AO95486 1093 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 P4HA1P13674 534 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CCDC130P13994 396 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 UCHL3P15374 230 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 EPCAMP16422 314 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 PBX1P40424 430 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 RAD23BP54727 409 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ROR1Q01973 937 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 DRAP1Q14919 205 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 SLC39A12Q504Y0 691 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 MDH1BQ5I0G3 518 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 SDHAF4Q5VUM1 108 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ZNF280DQ6N043 979 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 TMEM270Q6UE05 265 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ANKS3Q6ZW76 656 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 UBR7Q8N806 425 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 C12orf76Q8N812 135 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ERGIC2Q96RQ1 377 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 GPR88Q9GZN0 384 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 FAM49BQ9NUQ9 324 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CDH22Q9UJ99 828 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 STXBP5LQ9Y2K9 1186 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 UNC80Q8N2C7 3258 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CYP26A1O43174 497 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 TGM5O43548 720 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CILPO75339 1184 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CFHP08603 1231 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CPB1P15086 417 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 GPR15P49685 360 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ZNF75DP51815 510 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ARID5AQ03989 594 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 HYAL1Q12794 435 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 TMEM86AQ8N2M4 240 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 SLC4A11Q8NBS3 891 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 GPR152Q8TDT2 470 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 TFAP2BQ92481 460 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ZSWIM1Q9BR11 485 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 NAA15Q9BXJ9 866 aaKnown RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ZCWPW1Q9H0M4 648 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 CYP3A43Q9HB55 503 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 NGRNQ9NPE2 291 aaKnown RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 DSEQ9UL01 958 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 BACE2Q9Y5Z0 518 aa9.42□□□□□ -0.9
SCAMP1-202ENST00000506858 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 TMEM265A0A087WTH1 108 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 H7C4K7 107 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 GFPT2O94808 682 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 CD19P15391 556 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 CYP2F1P24903 491 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 BRD2P25440 801 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 ADORA2BP29275 332 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 LHX1P48742 406 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 MFAP3P55082 362 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 CYP27A1Q02318 531 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 DLX2Q07687 328 aaPredicted RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 INCA1Q0VD86 236 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 DUSP4Q13115 394 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 PTPROQ16827 1216 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 E4F1Q66K89 784 aaPredicted RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 B3GALNT2Q8NCR0 500 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 SLC22A17Q8WUG5 538 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 GAS2L1Q99501 681 aaPredicted RBP9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 EMILIN2Q9BXX0 1053 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 B3GNT5Q9BYG0 378 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 ZNF518BQ9C0D4 1074 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
SCAMP1-202ENST00000506858 TMEM30AQ9NV96 361 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms