RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PAPLNO95428 1278 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 SEC24AO95486 1093 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 UCHL3P15374 230 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 RFX1P22670 979 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 LTBRP36941 435 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 PBX1P40424 430 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 RAD23BP54727 409 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 PSMC1P62191 440 aaKnown RBP13.69□□□□□ -0.22
TCOF1-210ENST00000506767 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 TCEAL8Q8IYN2 117 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 B3GALNT2Q8NCR0 500 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
TCOF1-210ENST00000506767 CASP10Q92851 521 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
TCOF1-210ENST00000506767 TMEM176AQ96HP8 235 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 TNIP3Q96KP6 325 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 LPIN3Q9BQK8 851 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-210ENST00000506767 ELOVL4Q9GZR5 314 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 DAAM1Q9Y4D1 1078 aa13.69□□□□□ -0.22
TCOF1-210ENST00000506767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 EPHB6O15197 1021 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 ZNF132P52740 706 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 MAPRE1Q15691 268 aaKnown RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 NFE2Q16621 373 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 CCDC142Q17RM4 750 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SARM1Q6SZW1 724 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SPATA31D4Q6ZUB0 917 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 RTL10Q7L3V2 364 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 SHC3Q92529 594 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 PGLYRP2Q96PD5 576 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
TCOF1-210ENST00000506767 GPR88Q9GZN0 384 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 MAN1C1Q9NR34 630 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 CLEC1BQ9P126 229 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 FHOD1Q9Y613 1164 aa13.68□□□□□ -0.22
TCOF1-210ENST00000506767 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PTPRDP23468 1912 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 AP5Z1O43299 807 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 TBX10O75333 385 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PAEPP09466 180 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 DLX2Q07687 328 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-210ENST00000506767 ORC1Q13415 861 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 CFAP221Q4G0U5 840 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 ZNF394Q53GI3 561 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PAQR9Q6ZVX9 377 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 ATAD1Q8NBU5 361 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 MYLPFQ96A32 169 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
TCOF1-210ENST00000506767 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 ABCB6Q9NP58 842 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 FAM207AQ9NSI2 230 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-210ENST00000506767 DZANK1Q9NVP4 752 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 CEP72Q9P209 647 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 PCDHB4Q9Y5E5 795 aa13.67□□□□□ -0.22
TCOF1-210ENST00000506767 UNC80Q8N2C7 3258 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 FOXN3O00409 490 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 ZMYND10O75800 440 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 HOXA9P31269 272 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 ELF1P32519 619 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 JAM2P57087 298 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 POLR2FP61218 127 aaKnown RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 DUSP4Q13115 394 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 SYCE2Q6PIF2 218 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 C4orf50Q6ZRC1 276 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 CCDC149Q6ZUS6 474 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 SPATA2LQ8IUW3 424 aaPredicted RBP13.66□□□□□ -0.22
TCOF1-210ENST00000506767 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
TCOF1-210ENST00000506767 TTC9BQ8N6N2 239 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms