RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CYP2J2P51589 502 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 CDR1P51861 262 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 NDUFA8P51970 172 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 MYL7Q01449 175 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 TSPY1Q01534 308 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 PSMD2Q13200 908 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 NFE2Q16621 373 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 MGAT5BQ3V5L5 792 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 KMT5BQ4FZB7 885 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 TRAPPC11Q7Z392 1133 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 SLC9A9Q8IVB4 645 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 MFSD6LQ8IWD5 586 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 ADGRF2Q8IZF7 708 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 GOLGA5Q8TBA6 731 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 PLEKHO2Q8TD55 490 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 DEPDC1BQ8WUY9 529 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 KBTBD7Q8WVZ9 684 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 E2F7Q96AV8 911 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 RSPRY1Q96DX4 576 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 HPDLQ96IR7 371 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 TRMT61BQ9BVS5 477 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 SCAND2PQ9GZW5 306 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 KCTD10Q9H3F6 313 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 ABCB6Q9NP58 842 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 LTB4R2Q9NPC1 389 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 EXOC1Q9NV70 894 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 DDX43Q9NXZ2 648 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 ABI2Q9NYB9 513 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 SIT1Q9Y3P8 196 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 PCDHB5Q9Y5E4 795 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 MIA3Q5JRA6 1907 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 DENND4CQ5VZ89 1909 aa9.74□□□□□ -0.85
PDLIM5-209ENST00000506632 OBSL1O75147 1896 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 KIF26AQ9ULI4 1882 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 LRRN2O75325 713 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 STAU1O95793 577 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 F11P03951 625 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 DCNP07585 359 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 DLATP10515 647 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 RFX1P22670 979 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 PCSK1P29120 753 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CDC25CP30307 473 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 VIPR2P41587 438 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CLDN10P78369 228 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 FCHO2Q0JRZ9 810 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 GRM2Q14416 872 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 VEPH1Q14D04 833 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 ANGPT1Q15389 498 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CCDC142Q17RM4 750 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CFAP221Q4G0U5 840 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 FAM171BQ6P995 826 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 TMEM150AQ86TG1 271 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 ARID3BQ8IVW6 561 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 PARD3BQ8TEW8 1205 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 IRF7Q92985 503 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 CLDN23Q96B33 292 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 FNBP1Q96RU3 617 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 PI4K2AQ9BTU6 479 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 XYLT2Q9H1B5 865 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 ATXN3LQ9H3M9 355 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 GOLPH3LQ9H4A5 285 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 SLITRK6Q9H5Y7 841 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 HEBP1Q9NRV9 189 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 OBP2AQ9NY56 170 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 MTF2Q9Y483 593 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-209ENST00000506632 PATJQ8NI35 1801 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 PTPRDP23468 1912 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 TICRRQ7Z2Z1 1910 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FAM186AA6NE01 2351 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 MYBPHLA2RUH7 354 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 PDXKO00764 312 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CHADO15335 359 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 EXOC3O60645 756 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 TACC1O75410 805 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 NOL4O94818 638 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 RHOBTB3O94955 611 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 PRAMEF12O95522 483 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 RPN1P04843 607 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 FAM163BP0C2L3 166 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CSH1P0DML2 217 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CSH2P0DML3 217 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 TNNI1P19237 187 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CD72P21854 359 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 WARSP23381 471 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 CYP2F1P24903 491 aa9.72□□□□□ -0.85
PDLIM5-209ENST00000506632 LMO2P25791 158 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms