RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	RPS9	P46781	194 aa	Known RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	MLLT6	P55198	1093 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	PLCB2	Q00722	1185 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	MAPRE1	Q15691	268 aa	Known RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	SNRNP35	Q16560	246 aa	Known RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ARHGAP29	Q52LW3	1261 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	INTS6L	Q5JSJ4	861 aa	Known RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	C4orf50	Q6ZRC1	276 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ADGRF2	Q8IZF7	708 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	XXYLT1	Q8NBI6	393 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ZSWIM2	Q8NEG5	633 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	HPS3	Q969F9	1004 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	HPDL	Q96IR7	371 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ZSWIM3	Q96MP5	696 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	LPIN3	Q9BQK8	851 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	IER2	Q9BTL4	223 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	LRRC3	Q9BY71	257 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	BLZF1	Q9H2G9	400 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	TASP1	Q9H6P5	420 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ABCB6	Q9NP58	842 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	AGPAT3	Q9NRZ7	376 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	EXOC1	Q9NV70	894 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	THG1L	Q9NWX6	298 aa	Known RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	OBP2A	Q9NY56	170 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	DLGAP2	Q9P1A6	1054 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	RCOR1	Q9UKL0	485 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	FBXO4	Q9UKT5	387 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ZDHHC9	Q9Y397	364 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	PTPRZ1	P23471	2315 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	FAM186A	A6NE01	2351 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	OBSL1	O75147	1896 aa		11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-222	ENST00000506018	PRR23A	A6NEV1	266 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	SOBP	A7XYQ1	873 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	SOAT2	O75908	522 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CLSTN1	O94985	981 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	KIF20A	O95235	890 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	SLFN14	P0C7P3	912 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	DLAT	P10515	647 aa	Known RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	ATF6	P18850	670 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	WEE1	P30291	646 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	AVPR1A	P37288	418 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	VIPR2	P41587	438 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CYP2J2	P51589	502 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	KPNA1	P52294	538 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	PSMD2	Q13200	908 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	TRPC3	Q13507	836 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	KNOP1	Q1ED39	458 aa	Known RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CLEC17A	Q6ZS10	378 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	GAREM2	Q75VX8	874 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CBWD2	Q8IUF1	395 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	NELFCD	Q8IXH7	590 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	TTC9B	Q8N6N2	239 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	GIPC2	Q8TF65	315 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	FAM3C	Q92520	227 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	MRPS31	Q92665	395 aa	Known RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CCDC34	Q96HJ3	373 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	SPATA32	Q96LK8	384 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	MMS19	Q96T76	1030 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	PI4K2A	Q9BTU6	479 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	L1RE1	Q9UN81	338 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	PIAS3	Q9Y6X2	628 aa		11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	RIF1	Q5UIP0	2472 aa	Known RBP	11.17	□□□□□ -0.62
NR1I3-222	ENST00000506018	CLIC2	O15247	247 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	ATMIN	O43313	823 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	EXOC3	O60645	756 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	LMNA	P02545	664 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	SP9	P0CG40	484 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CD72	P21854	359 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	TARS	P26639	723 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	WNT7B	P56706	349 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	TNNC1	P63316	161 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	FCHO2	Q0JRZ9	810 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CUL4B	Q13620	913 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	LRRC32	Q14392	662 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	PSMD6	Q15008	389 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	BMT2	Q1RMZ1	405 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	ZNF528	Q3MIS6	628 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	LRRTM3	Q86VH5	581 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CELF5	Q8N6W0	485 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	FSIP1	Q8NA03	581 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	RDH13	Q8NBN7	331 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	GLIS3	Q8NEA6	775 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	BPIFB1	Q8TDL5	484 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	SCFD1	Q8WVM8	642 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CLDN23	Q96B33	292 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CGRRF1	Q99675	332 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	KIF9	Q9HAQ2	790 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	SLC39A2	Q9NP94	309 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	EHD2	Q9NZN4	543 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	CDH9	Q9ULB4	789 aa		11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	NDRG2	Q9UN36	371 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-222	ENST00000506018	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.16	□□□□□ -0.62

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