RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 WNT8BQ93098 351 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 C18orf25Q96B23 403 aaPredicted RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 C18orf8Q96DM3 657 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 PNKPQ96T60 521 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 CXCL16Q9H2A7 254 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SLITRK6Q9H5Y7 841 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 ARFGAP3Q9NP61 516 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 RBM12Q9NTZ6 932 aaKnown RBP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SMARCAL1Q9NZC9 954 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 EHD2Q9NZN4 543 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 KLK14Q9P0G3 267 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 TUBGCP4Q9UGJ1 667 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 IP6K2Q9UHH9 426 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL4A5-208ENST00000505728 SNX9Q9Y5X1 595 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 VCANP13611 3396 aa8.53□□□□□ -1.04
COL4A5-208ENST00000505728 PRUNE2Q8WUY3 3088 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 GOLGA6L10A0A0M3HER8 536 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 A0A0U1RQG5 324 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 SIGLEC16A6NMB1 481 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 KPNA7A9QM74 516 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 O00370 1275 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 KRIT1O00522 736 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PPEF2O14830 753 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 MICAL2O94851 1124 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 FGGP02679 453 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 CTSHP09668 335 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 TNFRSF8P28908 595 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 GPD2P43304 727 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 MAGEA10P43363 369 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 GABRB2P47870 512 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 SNX16P57768 344 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 RNASE9P60153 205 aaKnown RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 VSNL1P62760 191 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PAK2Q13177 524 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PIGHQ14442 188 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PTPROQ16827 1216 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 LONRF2Q1L5Z9 754 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 LRRC26Q2I0M4 334 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 GLRA4Q5JXX5 417 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 DCAF12L1Q5VU92 463 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 DNAJC24Q6P3W2 148 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 CRYBG2Q8N1P7 616 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 TOP6BLQ8N6T0 577 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 OR6B3Q8NGW1 331 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 CCDC26Q8TAB7 109 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 FNIP1Q8TF40 1166 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 MAIP1Q8WWC4 291 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 ALG3Q92685 438 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 KRT35Q92764 455 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PGBD4Q96DM1 585 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 BTBD6Q96KE9 485 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 TWNKQ96RR1 684 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 MRPL45Q9BRJ2 306 aaKnown RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 AGO3Q9H9G7 860 aaKnown RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 UBN1Q9NPG3 1134 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 CHORDC1Q9UHD1 332 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PADI3Q9ULW8 664 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 PHF24Q9UPV7 400 aa8.52□□□□□ -1.05
COL4A5-208ENST00000505728 A0A0U1RQF3 1178 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 FAM170AA1A519 330 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 ARVCFO00192 962 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PTGESO14684 152 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PSTPIP1O43586 416 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 HUS1O60921 280 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 ABCB7O75027 752 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 THP07101 528 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 GHRP10912 638 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
COL4A5-208ENST00000505728 CD52P31358 61 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 RPL9P32969 192 aaKnown RBP8.51□□□□□ -1.05
COL4A5-208ENST00000505728 GNL1P36915 607 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-208ENST00000505728 LILRA4P59901 499 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 SOX4Q06945 474 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-208ENST00000505728 LPIN1Q14693 890 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 ACAP1Q15027 740 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 SOWAHAQ2M3V2 549 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PTPN20Q4JDL3 420 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PKDCCQ504Y2 493 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PPP1R15BQ5SWA1 713 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 BEND6Q5SZJ8 279 aaPredicted RBP8.51□□□□□ -1.05
COL4A5-208ENST00000505728 LRRC38Q5VT99 294 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 DCUN1D2Q6PH85 259 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 Q7L0L9 218 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 HDXQ7Z353 690 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 MAATS1Q7Z4T9 603 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 PHLDB2Q86SQ0 1253 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
COL4A5-208ENST00000505728 IFT20Q8IY31 132 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms