RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 TSC2P49815 1807 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 C9IYK1 514 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 HUS1O60921 280 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 SCNN1AP37088 669 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 MLH1P40692 756 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PIGHQ14442 188 aaPredicted RBP14.07□□□□□ -0.16
LMNA-220ENST00000504687 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 ACAP1Q15027 740 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PTPN20Q4JDL3 420 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 DCAF12L1Q5VU92 463 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 TMEM130Q8N3G9 435 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PDCL2Q8N4E4 241 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 MCRS1Q96EZ8 462 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 TNIP3Q96KP6 325 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 ZFP42Q96MM3 310 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 GAD1Q99259 594 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 PARD6BQ9BYG5 372 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
LMNA-220ENST00000504687 ELAC1Q9H777 363 aaKnown RBP14.07□□□□□ -0.16
LMNA-220ENST00000504687 ARHGEF37A1IGU5 675 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 CEP104O60308 925 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 TNFRSF8P28908 595 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 GNL1P36915 607 aaPredicted RBP14.06□□□□□ -0.16
LMNA-220ENST00000504687 RWDD2BP57060 319 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 PDCLQ13371 301 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 UPP1Q16831 310 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 LRRC8DQ7L1W4 858 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 ARCQ7LC44 396 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 ANKRD33Q7Z3H0 272 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 ZDHHC17Q8IUH5 632 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
LMNA-220ENST00000504687 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 ALG3Q92685 438 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
LMNA-220ENST00000504687 PSMB7Q99436 277 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 SLC4A5Q9BY07 1137 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 MIOSQ9NXC5 875 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 CYTH4Q9UIA0 394 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 TSPAN16Q9UKR8 245 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 L1RE1Q9UN81 338 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
LMNA-220ENST00000504687 NME7Q9Y5B8 376 aa14.06□□□□□ -0.16
LMNA-220ENST00000504687 MEIS3P2A8K0S8 358 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 BHMG1C9JSJ3 638 aaPredicted RBP14.05□□□□□ -0.16
LMNA-220ENST00000504687 SPOPO43791 374 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 CYP11A1P05108 521 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 PFKMP08237 780 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 CCL5P13501 91 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 LHX1P48742 406 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 TUSC3Q13454 348 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 FBXO38Q6PIJ6 1188 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 TMEM110Q86TL2 294 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 XYLT1Q86Y38 959 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 ADGRF2Q8IZF7 708 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 ANKRD52Q8NB46 1076 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 SLC35F5Q8WV83 523 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 APBB2Q92870 758 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 TOX2Q96NM4 488 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 CPXM1Q96SM3 734 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 SNX25Q9H3E2 840 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 SLITRK6Q9H5Y7 841 aa14.05□□□□□ -0.16
LMNA-220ENST00000504687 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
LMNA-220ENST00000504687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.05□□□□□ -0.16
LMNA-220ENST00000504687 A8MXQ7 604 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 TMEM189-UBE2V1I3L0A0 370 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 M0QYV0 167 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 PODXLO00592 558 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 CYB561D2O14569 222 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 FGFR1P11362 822 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 SCNN1GP51170 649 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 C2orf54Q08AI8 447 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 PPP1R26Q5T8A7 1209 aaPredicted RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 POLNQ7Z5Q5 900 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 CTU1Q7Z7A3 348 aaKnown RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 RTN4RL1Q86UN2 441 aaPredicted RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 RHOT1Q8IXI2 618 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 KATNAL2Q8IYT4 538 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 IPO4Q8TEX9 1081 aaKnown RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 MAIP1Q8WWC4 291 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 KRT35Q92764 455 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 SENP8Q96LD8 212 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 HNRNPABQ99729 332 aaKnown RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 NCAPGQ9BPX3 1015 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 GOLGA2P5Q9HBQ8 144 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
LMNA-220ENST00000504687 KANSL3Q9P2N6 904 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 HESX1Q9UBX0 185 aa14.04□□□□□ -0.16
LMNA-220ENST00000504687 M0QZQ0 153 aa14.03□□□□□ -0.16
LMNA-220ENST00000504687 ERLIN1O75477 346 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms